Pairwise Alignments

Query, 529 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 532 a.a., putative ABC transporter ATP-binding protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  283 bits (724), Expect = 1e-80
 Identities = 179/530 (33%), Positives = 268/530 (50%), Gaps = 8/530 (1%)

Query: 4   ITLSALSWSKPDGEHVFSDLDLAFGP-ERTGLVGRNGIGKTSVLNIIAGTLRPSSGTVAI 62
           I++  +S+  PD E +FSDL+ A    ++ GLVG NG GK+++L IIAG L PSSG +  
Sbjct: 3   ISIQQISYIHPDKEVLFSDLNFAISKGQKLGLVGNNGCGKSTLLQIIAGQLAPSSGVIVR 62

Query: 63  QGRVALARQILRAGADETIADVFGATQAVAVLRRAEKGDASVEELETA--DWTVEERIVS 120
              +    Q        TIA           L     GDAS+E       DW +EER V+
Sbjct: 63  PDDLYYIPQHFGQYDSLTIAQALQIDHKQKALHAILAGDASIENFSILNDDWNIEERSVA 122

Query: 121 ALARLGL-EARADTLLNQLSGGQRTRAVLAAAIFSEPDFLLLDEPTNNLDRDGRRAVIGL 179
           AL   GL +      +N LSGG++TR  LA      P  +L+DEPTN+LD  GR+ +   
Sbjct: 123 ALDSWGLGQFPLSYPMNLLSGGEKTRVFLAGMDIHNPSVILMDEPTNHLDSSGRQRLYDW 182

Query: 180 LSGWRSGAIVVSHDRELLEEMDAIIELTSLGTKRYGGGWSAYQAARAVELEAAQQSLTLA 239
           +  WRS  +VVSHDR LL  +  I EL       YGG +  Y+  + +  EA QQ +   
Sbjct: 183 VEKWRSTLLVVSHDRTLLNLLPEICELEKHQISYYGGNYEFYKEQKTLMQEALQQRIEEK 242

Query: 240 RKTADEVDRKARALAERLDKRDASGTRKAAKGDMPRILVGRRKSNAEESRGKSVELAERR 299
            K      + AR  AER DK++  G ++  K  +PRI++   +S +E+S  K     + +
Sbjct: 243 EKALRTARKVARETAERRDKQNVRGEKRNLKKGVPRIVLNGLQSKSEKSTAKLTGAHQEK 302

Query: 300 RAGALDAVTAAKARIEVLQPFSIRLPRTELPAGRQVLAFDGVTAGYDPARPII--RDLSF 357
                D     ++ +            + L  G+ ++  + +  GY P +P +    LSF
Sbjct: 303 AEKLTDERNQLRSSLSPTAALKTDFNNSGLHTGKILVTAEEINFGYHPDQPQLWQAPLSF 362

Query: 358 SLVGPRRVSVTGPNGSGKTSLLKVVTGELPPFKGT-VSVNVPFTLLDQSVSILERGETIL 416
            L    R+ + G NGSGKT+LLK++TG+L P KGT +  N  +  L+Q  SI+    +IL
Sbjct: 363 QLKSGDRLRIEGGNGSGKTTLLKIITGQLQPLKGTLIQANFTYVYLNQEYSIINDRNSIL 422

Query: 417 ENFKRLN-PGASDNACRAALASFRFRADAALQRVEALSGGQVLRAGLACALGGSDPPSLL 475
           E     N     ++  +  L  + F A    +    LSGG+ +R    C +  ++ P + 
Sbjct: 423 EQAYAFNGRNLPEHEIKIILNRYLFPASEWDKSCRKLSGGEKMRLAFCCLMISNNMPDMF 482

Query: 476 ILDEPTNHLDIDSIEAVEAGLLSYDGALVVVSHDETFLANIGIGTRVELS 525
           ILDEPTN+LDI SIE + A + +Y G ++ +SHD  F+  IG+   + LS
Sbjct: 483 ILDEPTNNLDIQSIEIITATIKNYAGTVIAISHDNYFIQEIGVEQSIFLS 532