Pairwise Alignments

Query, 188 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 203 a.a., transcriptional regulator, TetR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 61.2 bits (147), Expect = 1e-14
 Identities = 58/203 (28%), Positives = 88/203 (43%), Gaps = 19/203 (9%)

Query: 1   MARIKEFDRDEALDAAIAVFREHGFEGTSTEMLLKAMKIGRQSLYDTFGDKWKLYCLAVE 60
           MAR   FDR E L  A+ +F   GF  TS   L++ + I R SLY++FGDK  LY   + 
Sbjct: 1   MARSCNFDRQEKLILAMELFWRKGFAETSIADLVEHLGINRFSLYNSFGDKQSLYRECLR 60

Query: 61  RYSASETSAHIALLRGKPRALEGIRLVMERVV---DNANQACLGVNSICEFGQSRPDLAA 117
            Y    +      L      L  I   + R V         C   N++ E      D   
Sbjct: 61  FYLDHFSFGTQEQLLHPQAGLVDILTYLARFVALQREQKYGCFMQNALME---KCLDDDC 117

Query: 118 LHHAADRR---LKNVVVERIREAQAAGDLAVSLPAEAVADFLVANIAGIRIAARG----- 169
           +     RR   L++   + +  +Q+ G+L++S+  EA+A FLV  + GIR+  +      
Sbjct: 118 VQQECQRRFAQLQSTFTQVLTHSQSQGELSLSVQPEALAAFLVLQLQGIRVLGKAKEYTL 177

Query: 170 -----GARREHLQSLSRLALRAV 187
                G   E+L+ L+   L  V
Sbjct: 178 LDNAFGVLSEYLKRLALTPLNPV 200