Pairwise Alignments

Query, 389 a.a., Permease, MFS from Sinorhizobium meliloti 1021

Subject, 397 a.a., multidrug effflux MFS transporter from Pseudomonas fluorescens SBW25-INTG

 Score =  119 bits (298), Expect = 1e-31
 Identities = 97/365 (26%), Positives = 164/365 (44%), Gaps = 18/365 (4%)

Query: 26  DLVLPAIPAMPTALGGTAALAQMVLAAYAGGTLVGLLTFGELGARYSRRKLLVWSLGLFA 85
           D  LP  PAM TA        Q+ LA Y  G  +G L +G L  R+ RR  L+  + LF 
Sbjct: 21  DFYLPGFPAMATAFATDEKHIQLTLAVYFAGLAIGQLIYGPLADRFGRRGPLLSGVTLFT 80

Query: 86  VTSLLSAYAPTLEWLVILRFAQGAFGSGPAVFAPGFIHGLYPGDKAPSMFGRLGSIESLT 145
           + S   A+AP+LEWL+  RF Q   G    V +   +        +  ++ +L  +  L 
Sbjct: 81  LASFACAFAPSLEWLIAARFVQALGGCAGMVISRAVVSDKCDPVGSAKVYSQLMLVTGLA 140

Query: 146 PALAPIAGAYLMTVGGWQTSFLMLAGLAILCAVGSWAYRQSLPDRLEALEVHQ------- 198
           P LAP+AG  ++ V GWQ+ FL L+  +++ A+   A    LP+   A +  Q       
Sbjct: 141 PILAPLAGGLMVGVWGWQSIFLALSLFSVMAAI---AVAVGLPETFPAHQPRQPLSGSLR 197

Query: 199 SYMSIIRNGDFLRHGLSQALSLGSILIFVFGAPAVMTGALGMTIGDFILLQVFGIALFIL 258
            Y +++ +  +L + L+  +S+  +  ++ G+P V     G+    +  L     A FIL
Sbjct: 198 RYGALLSDRVYLGYALTGGISIAGMFAYIAGSPFVFIKLYGVPAEHYGWLFGSNAAGFIL 257

Query: 259 ASNASNALARRFGIERMIMIGTGSLVLGFLLILLYTSLGGRSL-TVLVPLWMTANGAFGI 317
            +  +  L  + G   ++       +L  L +L   +L   +L  +LVPL++        
Sbjct: 258 VAQVNARLLAKRGPAFLLSRTVWVYLLAALTLLGIAALRTDALWPLLVPLFI----CIAS 313

Query: 318 RGPIGFHQAIVASRGDHSR---GAALVVAAILGITAGGTAAAAPFINVGWWPLALASSLA 374
            G I  + +  A  G  +R    +AL+     G+ AG  +      +    P+A+  SL 
Sbjct: 314 LGCILPNTSACAMSGQGARAGSASALLGCIQFGVAAGAASLVGVLHDGTAMPMAMVISLC 373

Query: 375 ALLAL 379
            +LA+
Sbjct: 374 GVLAV 378