Pairwise Alignments

Query, 389 a.a., Permease, MFS from Sinorhizobium meliloti 1021

Subject, 430 a.a., inner membrane transport protein YdhC (RefSeq) from Shewanella loihica PV-4

 Score =  100 bits (248), Expect = 1e-25
 Identities = 97/391 (24%), Positives = 166/391 (42%), Gaps = 28/391 (7%)

Query: 18  TVLGIAGTDLVLPAIPAMPTALGGTAALAQMVLAAYAGGTLVGLLTFGELGARYSRRKLL 77
           ++LG   TD+ LPA  A+ T+L  +A      L  +  G  +G L +G L     +R  L
Sbjct: 17  SMLGFIATDMYLPAFKAIETSLDASATQVASSLTFFLAGLALGQLLYGPLVQAIGKRLSL 76

Query: 78  VWSLGLFAVTSLLSAYAPTLEWLVILRFAQGAFGSGPAVFAPGFIHGLYPGDKAPSMFGR 137
           V  L LF   SL+ A + ++    + RF Q       +V     +   Y   +A  +F  
Sbjct: 77  VLGLVLFGAASLVIANSDSIAMFNVARFFQALGACSASVIWQAIVIDRYKASEAQQVFSN 136

Query: 138 LGSIESLTPALAPIAGAYLMTVGGWQTSFLMLAGLAILCAVGSWAY-------------- 183
           +  + +L+PALAPI GAYL+    W + F +L GL++L  + + A+              
Sbjct: 137 IMPLVALSPALAPILGAYLLEWQQWHSIFFILGGLSLLLILATLAWVESKESLNSKADEA 196

Query: 184 --RQSLPDRLEALEVHQSYMSIIRNGDFLRHGLSQALSLGSILIFVFGAPAVMT--GALG 239
             +Q   D      V  SY++++ +  +L + L       +   ++   P VM   G   
Sbjct: 197 ISQQGSTDTQVQKSVRVSYLAMLASPRYLGNVLIFGACSAAFFSYLTLWPIVMEQHGYEA 256

Query: 240 MTIGDFILLQVFGIALFILASNASNALARRFGIE---RMIMIGTGSLVLGFLLI-LLYTS 295
             IG   + Q     +FIL    S    RR G E     +++  G+ V G  L+ L Y S
Sbjct: 257 KAIGLSFIPQT---VMFILGGYLSKLFIRRLGAEVTLTWVLLLFGACVAGIALVTLCYPS 313

Query: 296 LGGRSLTVLVPLWMTANGAFGIRGPIGFHQAIVASRGDHSRGAALVVAAILGITAGGTAA 355
                L  +  +   ANGA     PI  + A+   +   ++ A L     + I  G ++ 
Sbjct: 314 STIWPLLSIFSVMAAANGAC---YPIVVNSALQVFKQASAKAAGLQNFLQISIAFGASSL 370

Query: 356 AAPFINVGWWPLALASSLAALLALLCLKLIG 386
            A + + G   + +   ++A+  L+  ++ G
Sbjct: 371 VALWASSGEKAIGVGIVVSAIGVLIGFQVRG 401