Pairwise Alignments

Query, 389 a.a., Permease, MFS from Sinorhizobium meliloti 1021

Subject, 423 a.a., inner membrane transport protein YdhC (RefSeq) from Shewanella sp. ANA-3

 Score =  114 bits (284), Expect = 7e-30
 Identities = 98/389 (25%), Positives = 173/389 (44%), Gaps = 19/389 (4%)

Query: 3   VNVSPTVMFLLISFGTVLGIAGTDLVLPAIPAMPTALGGTAALAQMVLAAYAGGTLVGLL 62
           VN+   +    ++  ++LG   TD+ LPA  A+ ++   T +   M L  +  G  +G L
Sbjct: 9   VNMKFFIFLFYLALLSMLGFIATDMYLPAFKAIESSFNSTPSQVAMSLTCFLAGLALGQL 68

Query: 63  TFGELGARYSRRKLLVWSLGLFAVTSLLSAYAPTLEWLVILRFAQGAFGSGPAVFAPGFI 122
            +G L ++  +R  L+  LG+FA+ S+  A + ++  L I RF Q        V     +
Sbjct: 69  IYGPLVSKLGKRYALILGLGIFALASVAIANSDSILMLNIARFFQAVGACSAGVIWQAIV 128

Query: 123 HGLYPGDKAPSMFGRLGSIESLTPALAPIAGAYLMTVGGWQTSFLMLAGLAILCAVGSWA 182
              Y  +KA  +F  +  + +L+PALAPI GAY++   GW+  F+ L  +A L  + +  
Sbjct: 129 VEQYDAEKAQGIFSNIMPLVALSPALAPILGAYILNDFGWRAIFISLCVIAFLLVLMTLY 188

Query: 183 YRQSLPDRLEALEVHQSYMSIIRNGDFLRHGLSQALSLGSILIFVFGAPAVMT--GALGM 240
           +  S  +  +      SY  I++N  +L + +      G+   ++   P VM   G    
Sbjct: 189 FVPSHAEHQDTRPSAVSYGQILKNTRYLGNVVIFGACSGAFFAYLTVWPIVMEQHGYQAT 248

Query: 241 TIGDFILLQVFGIALFILASNASNALARRFGIERMIMIGTGSLVLGFLLILLYTSLGGRS 300
            IG   + Q     +FI+   AS  L +R G +R + +      L  + I+ +T L    
Sbjct: 249 EIGLSFIPQTI---MFIVGGYASKLLIKRIGADRTLNVLLAIFGLCVISIVFFTLLMKAE 305

Query: 301 ----LTVLVPLWMTANGAFGIRGPIGFHQAIVASRGDHSRGAALVVAAILGITAGGTA-- 354
               L +   +   ANGA     PI  + A+     + ++ A L     + I  G ++  
Sbjct: 306 TIFPLLISFSILAAANGAI---YPIVVNSALQQFTQNAAKAAGLQNFLQITIAFGASSLV 362

Query: 355 ---AAAPFINVGWWPLALASSLAALLALL 380
              A++  + +GW    L+ SL  +L  L
Sbjct: 363 ALWASSGEVAIGWG--ILSCSLVVILGYL 389