Pairwise Alignments

Query, 314 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 308 a.a., Nucleoside ABC transporter, permease protein 2 from Pseudomonas fluorescens FW300-N2E2

 Score =  208 bits (529), Expect = 2e-58
 Identities = 119/314 (37%), Positives = 183/314 (58%), Gaps = 15/314 (4%)

Query: 6   DIFASAGLWAAVLRIATPLILGTLGALLCERSGVLNLGIEGIMTFGAMIGWLAVYNGADL 65
           DI   + ++ A++R  TPL+L  LG L+CE+SGVLNLG EG+M FGA+IG++  +N  +L
Sbjct: 2   DIDLLSNIFYAMVRCGTPLLLVALGELVCEKSGVLNLGQEGMMLFGAVIGFIVAFNSGNL 61

Query: 66  WTGILVAGLSGGIFGLLHAGLTVTLGLSQHVSGLGVTLFASSFSYYVFRLLV--PVAGTP 123
           W G+L+A  +G +   L A + +    +Q  +GL +T+F    S +V    V  P+AG  
Sbjct: 62  WLGVLLAMAAGMLLSALFALVALVFNANQVATGLALTIFGVGLSSFVGAAWVGKPLAG-- 119

Query: 124 PTIEPFQPIDVPALSSLPFLGPALFTQTPPTYVAILLALVLGYVLFRTPLGLAIRMTGEN 183
                F+P+ +P LS +P +G  LF Q    Y++  L  ++ +++ ++ +GL I+  GEN
Sbjct: 120 -----FEPLAIPYLSDIPLIGRMLFAQDLLVYLSFALFALVAWMIVKSRVGLIIQAVGEN 174

Query: 184 PHAAEAQGINPMAIRFGSVIVGSALMGIGGAFLTLSAFNSFFPTMVQGRGWICIALVVFA 243
           P AA A G+  + +R  +V+ G A+ G+ GA+L+L+    +   M  GRGWI +ALVVFA
Sbjct: 175 PDAASAMGLPVLRVRTLAVLFGGAMAGLAGAYLSLAYTPMWAENMSAGRGWIALALVVFA 234

Query: 244 SWRPGRALVGALLFALFDGFQLRLQTRLSGVVPYQIFLMIPYLLSIAALALMAR-----R 298
           SWR  R L+GA LF L     L  Q  L   +P  +  M+PY  +I  L L++R     R
Sbjct: 235 SWRVWRLLLGAYLFGLASILHLVAQ-GLGLAIPSSLLAMLPYAATIVVLVLLSRDAVRTR 293

Query: 299 ARVPQALMQPYRRG 312
              P +L QP++ G
Sbjct: 294 LYAPVSLGQPWQSG 307