Pairwise Alignments

Query, 314 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 306 a.a., nucleoside ABC transporter membrane protein from Pseudomonas syringae pv. syringae B728a

 Score =  131 bits (330), Expect = 2e-35
 Identities = 91/289 (31%), Positives = 141/289 (48%), Gaps = 9/289 (3%)

Query: 13  LWAAVLRIATPLILGTLGALLCERSGVLNLGIEGIMTFGAMIGWLAVYNGADLWTGILVA 72
           L A  +R+ TP +  +LG  L E+SG +NLG+EGI+  GAM G+         W G+  A
Sbjct: 13  LLAGAIRVGTPFLFVSLGECLTEKSGRINLGLEGILVAGAMSGYAVACLSGSAWLGVGAA 72

Query: 73  GLSGGIFGLLHAGLTVTLGLSQHVS-GLGVTLFASSFSYYVFRLLVPVAGTPPTIEPFQP 131
              G + GLLH GL  +L     ++ G+ + L  +  ++++ +  +      P       
Sbjct: 73  AGVGILLGLLH-GLACSLPRVNDIAFGIALILLGTGLAFFLGKAFIQ-----PQAPMLPS 126

Query: 132 IDVPALSSLPFLGPALFTQTPPTYVAILLALVLGYVLFRTPLGLAIRMTGENPHAAEAQG 191
           + + A SS   +  AL       +V   LA VL + L  T  GL +R+ G++   A+A G
Sbjct: 127 LALGAWSSEERVRSALNINVL-FFVGAALAFVLHWGLRTTRWGLMLRLVGDHAETAQALG 185

Query: 192 INPMAIRFGSVIVGSALMGIGGAFLTLSAFNSFFPTMVQGRGWICIALVVFASWRPGRAL 251
             P+ +R  +  VG  L GIGGA+L+L    S+   +  G+G + +ALV+FA WRP   L
Sbjct: 186 YRPLKVRIVATAVGGGLAGIGGAYLSLYYPGSWNEGLSSGQGLMAVALVIFARWRPLACL 245

Query: 252 VGALLFALFDGFQLRLQTRLSGVVPYQIFLMIPYLLSIAALALMARRAR 300
             +LLF         LQ  +     Y +F   PY L++  +    RR R
Sbjct: 246 WASLLFGAAGAIGPALQA-VGISTGYYLFAAAPYALTLVVMYATCRRGR 293