Pairwise Alignments

Query, 314 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 308 a.a., nucleoside ABC transporter membrane protein from Pseudomonas syringae pv. syringae B728a

 Score =  172 bits (436), Expect = 9e-48
 Identities = 106/299 (35%), Positives = 162/299 (54%), Gaps = 11/299 (3%)

Query: 21  ATPLILGTLGALLCERSGVLNLGIEGIMTFGAMIGWLAVYNGADLWTGILVAGLSGGIFG 80
           A P  L  LG +L ERSGVL LG+EG+M  GA+ G     +       +L +  + G+  
Sbjct: 15  AVPFALAALGLILIERSGVLALGVEGLMLVGALAGIGMQLSLGSPGLSLLASMAAAGLVS 74

Query: 81  LLHAGLTVTLGLSQHVSGLGVTLFASSFSYYVFRLLVPVAGTPPTIEPFQPIDVPALSSL 140
           LL A + + L ++Q ++GL +  F    +  +  LL     T   +   Q +++  LS L
Sbjct: 75  LLFALMVLVLRINQVIAGLALVFFCQGLTGLLGTLL---GWTNRPVSGLQAVELWPLSEL 131

Query: 141 PFLGPALFTQTPPTYVAILLALVLGYVLFRTPLGLAIRMTGENPHAAEAQGINPMAIRFG 200
           P +G  +F Q P  Y+ +++ + + ++L RT  GL +R  GENP AA+A GI+ +  R  
Sbjct: 132 PVVG-RVFVQNPLVYLTVVIFIAVVWLLDRTRTGLRLRAVGENPQAADAAGISVLGYRLA 190

Query: 201 SVIVGSALMGIGGAFLTLSAFNSFFPTMVQGRGWICIALVVFASWRPGRALVGALLFALF 260
           +++ GSALMG+ G F+ + +   +   M  GRGWI ++LV+FA W P RAL GALLF   
Sbjct: 191 AIVAGSALMGLAGGFIAVLSTKMWIADMTGGRGWIAVSLVIFARWSPWRALAGALLFGGI 250

Query: 261 DGFQLRLQTRLSGV-VPYQIFLMIPYLLSIAALALMARRAR----VPQALMQPYRRGER 314
           +   L  Q   +GV +P    LM PY +++  +  +A   R     P AL +PY R ER
Sbjct: 251 EA--LIPQLAATGVRLPQYFVLMTPYAVTLLVMVWVASGKRQSSSQPGALGEPYIREER 307