Pairwise Alignments

Query, 314 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 369 a.a., nucleoside ABC transporter membrane protein from Pseudomonas syringae pv. syringae B728a

 Score = 55.8 bits (133), Expect = 2e-12
 Identities = 76/282 (26%), Positives = 119/282 (42%), Gaps = 20/282 (7%)

Query: 16  AVLRIATPLILGTLGALLCERSGVLNLGIEGIMTFGAMIGWLAV----YNGADLWTGILV 71
           AVL  A+P+I+  L   +  R+   NLG+EG M +GA IG  A+         L   +++
Sbjct: 79  AVLFQASPMIMVGLAGCMAFRARFWNLGLEGQMIWGA-IGATAISLFQVGPEALRLPLMM 137

Query: 72  AGLSGGIFGLLHAGLTVTLGLSQHVSGLGVTLFASSFSY-YVFRLLVPVAGTPPTIEPFQ 130
           A  +  I GLL +   V L L   V+ +  TL  +  +  ++  L+      P    P+ 
Sbjct: 138 A--AAVICGLLWSLGPVLLKLKWQVNEIISTLMLNYIAANFLLHLVYGSWKDPRDNFPYS 195

Query: 131 PIDVPALSSLPFLGPALFTQTPPTYVAILLALVLGYVLFRTPL---GLAIRMTGENPHAA 187
           P    +   LP L        P      L  LV G  L+   +   GL +R    NP  A
Sbjct: 196 PA-FQSFERLPDLFAGYNAAIP------LALLVTGLTLWFVGVSRAGLYLRFVDANPKVA 248

Query: 188 EAQGINPMAIRFGSVIVGSALMGIGGAFLTLSAFNSFFPTMVQGRGWICIALVVFASWRP 247
            A G+    +  G+V++  AL G+ G  +T         +  QG G+  I +   A   P
Sbjct: 249 GAVGVPVRKMIIGTVLLSGALAGLAGFVVTSGQEGRLTQSFYQGYGFSGILIAFLARNNP 308

Query: 248 GRALVGALLFALFDGFQLRLQTRLSGVVPYQIFLMIPYLLSI 289
             A V ALL A+   F      ++   +P+ +  +I  +L I
Sbjct: 309 VAATVVALLIAML--FVAGRNLQVFYQIPFSMVQLIQAILVI 348