Pairwise Alignments

Query, 314 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 309 a.a., nucleoside ABC transporter membrane protein from Pseudomonas syringae pv. syringae B728a

 Score =  209 bits (532), Expect = 7e-59
 Identities = 119/312 (38%), Positives = 182/312 (58%), Gaps = 11/312 (3%)

Query: 6   DIFASAGLWAAVLRIATPLILGTLGALLCERSGVLNLGIEGIMTFGAMIGWLAVYNGADL 65
           DI   + ++ A++R  TPL+L  LG L+CE+SGV+NLG EG+M FGA+IG++   N  +L
Sbjct: 3   DIDLLSNIFYAMVRCGTPLLLVALGELICEKSGVINLGQEGMMLFGAVIGFIVALNTGNL 62

Query: 66  WTGILVAGLSGGIFGLLHAGLTVTLGLSQHVSGLGVTLFASSFSYYVFRLLVPVAGTPPT 125
           W G+L+A L+G +   L A + +    +Q  +GL +T+F    S +V    V   G P  
Sbjct: 63  WLGVLLAMLAGMLLSALFALVALVFNANQVATGLALTIFGVGLSSFVGAAWV---GKP-- 117

Query: 126 IEPFQPIDVPALSSLPFLGPALFTQTPPTYVAILLALVLGYVLFRTPLGLAIRMTGENPH 185
           +  F+P+ +P LS +P +G  LF Q    Y++  L  ++ + L ++ +GL I+  GENP 
Sbjct: 118 LSGFEPVAIPLLSDIPLIGRMLFAQDLLVYLSFALFALVAWALLKSRVGLIIQAVGENPD 177

Query: 186 AAEAQGINPMAIRFGSVIVGSALMGIGGAFLTLSAFNSFFPTMVQGRGWICIALVVFASW 245
           AA A G+  + +R  +V+ G A+ G+ GA+L+L+    +   M  GRGWI +ALVVFASW
Sbjct: 178 AASAMGLPVLRVRTLAVLFGGAMAGLAGAYLSLAYTPMWAENMSAGRGWIALALVVFASW 237

Query: 246 RPGRALVGALLFALFDGFQLRLQTRLSGVVPYQIFLMIPYLLSIAALALMAR-----RAR 300
           R  R L+GA LF L     L  Q  +   +P  +  M+PY+ +I  L L++R     R  
Sbjct: 238 RVWRLLLGAYLFGLASILHLVAQ-GIGLAIPSNLLAMLPYVATIIVLVLLSRDALRTRLY 296

Query: 301 VPQALMQPYRRG 312
            P +L QP+R G
Sbjct: 297 APVSLGQPWRAG 308