Pairwise Alignments

Query, 314 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 293 a.a., branched-chain amino acid ABC-type transport system, permease component from Dechlorosoma suillum PS

 Score = 53.1 bits (126), Expect = 8e-12
 Identities = 74/283 (26%), Positives = 115/283 (40%), Gaps = 38/283 (13%)

Query: 16  AVLRIATPLILGTLGALLCERSGVLNLGIEGIMTFGAMIGWLAVYNGADLWTGILVAGLS 75
           A+  +   L+ G L  +      V  +G    +   AM+  L     A LW  +L A + 
Sbjct: 17  ALFALGFTLVFGVLAVINLSHGAVFMVGSYAAL---AMVSHL----NAPLWVAMLGAMVV 69

Query: 76  GGIFGLLHAGLTV-------TLGLSQHVSGLGVTLFASSFSYYVFRLLVPVAGTPPTIEP 128
            G  GLL   L +          L   ++ +GV +  +S +  +F     V   P  + P
Sbjct: 70  SGTIGLLVDVLVLKPLRARNAPHLIPMIATIGVGIMLTSAAQGLFG--AEVLRFPEDVMP 127

Query: 129 ---FQPIDVPALSSLPFLGPALFTQTPPTYVAILLALVLGYVLFRTPLGLAIRMTGENPH 185
              F   DV   +           +     +A LL  VL  +L RT LG A+R   E+P 
Sbjct: 128 AGEFMVGDVHVRA----------LEIAIVAIAFLLMAVLFTILKRTQLGRALRAIAESPK 177

Query: 186 AAEAQGINPMAIRFGSVIVGSALMGIGGAFLTLSAFNSFFPTMVQGRGWICIALVVFASW 245
           AA   GIN   +   +  V +AL GI G  + L+ FN+  P M Q      IA+++    
Sbjct: 178 AAYLLGINVEGLFHITSFVAAALGGIAGVLIGLN-FNAITPFMGQPMLHKGIAVIILGGM 236

Query: 246 RPGRALVGALLFALFDGF-----QLRLQTRLSGVVPYQIFLMI 283
              R   GAL+  LF GF     +  L +++   V + +  +I
Sbjct: 237 GDIR---GALIGGLFLGFAEVISKAYLSSQMGDAVAFGLLFLI 276