Pairwise Alignments

Query, 314 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 308 a.a., inner-membrane translocator (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  201 bits (512), Expect = 1e-56
 Identities = 115/284 (40%), Positives = 161/284 (56%), Gaps = 6/284 (2%)

Query: 15  AAVLRIATPLILGTLGALLCERSGVLNLGIEGIMTFGAMIGWLAVYNGADLWTGILVAGL 74
           AA ++  TP++  TLG +  ERSGVLNLG+EG+M  GA  G+L  +   + W G+L AGL
Sbjct: 13  AATVQSGTPILFATLGEMFTERSGVLNLGVEGMMIVGAFSGFLVTHITGNPWAGVLAAGL 72

Query: 75  SGGIFGLLHAGLTVTLGLSQHVSGLGVTLFASSFSYYVFRLLVPVAGTPPTIEPFQPIDV 134
            GG   LLH  + +    +Q VSGL +T+     + +   L  P  G   T   FQ   V
Sbjct: 73  CGGGLSLLHGVVCLIFQGNQVVSGLALTILGLGLADF---LGTPYVGITTT--GFQAFAV 127

Query: 135 PALSSLPFLGPALFTQTPPTYVAILLALVLGYVLFRTPLGLAIRMTGENPHAAEAQGINP 194
           P L+ +P LG   F      Y++ LL  +    + RT  GLA+R  GE+P AA A G++P
Sbjct: 128 PVLADIPVLGAIFFRHDALVYLSYLLPPLFWLFMARTRPGLALRAAGEHPAAASAAGLSP 187

Query: 195 MAIRFGSVIVGSALMGIGGAFLTLSAFNSFFPTMVQGRGWICIALVVFASWRPGRALVGA 254
           + IR+  +  G  L GIGGA+L+L+  + +   M  GRGWI +ALV+FA WRPGRA+ GA
Sbjct: 188 VRIRWCGIFTGGFLAGIGGAYLSLAYTHLWTNNMTSGRGWIAVALVIFAFWRPGRAVFGA 247

Query: 255 LLFALFDGFQLRLQTRLSGVVPYQIFLMIPYLLSIAALALMARR 298
            LF      QLRLQ  +   +P  + LM+PY L++  L   + R
Sbjct: 248 YLFGGVMALQLRLQA-MGANLPSSLMLMLPYALTVLVLLASSLR 290