Pairwise Alignments

Query, 314 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 306 a.a., ABC transporter permease from Herbaspirillum seropedicae SmR1

 Score =  141 bits (356), Expect = 2e-38
 Identities = 92/292 (31%), Positives = 147/292 (50%), Gaps = 15/292 (5%)

Query: 13  LWAAVLRIATPLILGTLGALLCERSGVLNLGIEGIMTFGAMIGWLAVYNGADLWTGILVA 72
           L+A  +R+ TP +  +LG  L E+ G +NLG+EGI+  GAM G+ A +     W G+L A
Sbjct: 13  LFAGAIRVGTPFLFVSLGECLTEKGGRVNLGLEGILVCGAMTGYAASFYSGSAWLGVLAA 72

Query: 73  GLSGGIFGLLHAGLTVTLGLSQHVSGLGVTLFASSFSYYVFRLLVPVAGTPPTIEPFQP- 131
           G +G + G+LH  +     ++    G+ + L  +  ++++ +         P I+P  P 
Sbjct: 73  GCTGLLLGVLHGVVCSLPRVNDIAFGIALMLLGTGLAFFLGK---------PFIQPQAPM 123

Query: 132 ---IDVPALSSLPFLGPALFTQTPPTYVAILLALVLGYVLFRTPLGLAIRMTGENPHAAE 188
              ID+ A SS   L  AL       ++ ++LALVL + L  T  GLA+R+ G++   A 
Sbjct: 124 LPSIDLGAWSSNDRLHHALQINAL-FFIGVVLALVLQWGLSATRWGLALRLVGDHAETAR 182

Query: 189 AQGINPMAIRFGSVIVGSALMGIGGAFLTLSAFNSFFPTMVQGRGWICIALVVFASWRPG 248
           A G      R  +   G  L  +GGA+L+L    S+   +  G+G + +ALV+FA W+P 
Sbjct: 183 ALGYRLTGTRIAATAAGGFLAAVGGAYLSLYYPGSWNEGLSSGQGLMAVALVIFARWQPW 242

Query: 249 RALVGALLFALFDGFQLRLQTRLSGVVPYQIFLMIPYLLSIAALALMARRAR 300
           R L+ ALLF         LQ  +     Y +F   PY L++  + +  R  R
Sbjct: 243 RCLLAALLFGAAGALGPALQA-VGVTSGYYLFNAAPYALTLLIMIMTCRPDR 293