Pairwise Alignments

Query, 314 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 306 a.a., branched chain amino acid ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  217 bits (553), Expect = 2e-61
 Identities = 120/286 (41%), Positives = 169/286 (59%), Gaps = 6/286 (2%)

Query: 15  AAVLRIATPLILGTLGALLCERSGVLNLGIEGIMTFGAMIGWLAVYNGADLWTGILVAGL 74
           AA ++  TP++  TLG +L ER+GVLNLG+EG+M  G    +LA++   D W  ++VA L
Sbjct: 11  AAAVQCGTPILYATLGEMLTERAGVLNLGVEGMMIIGTFTAFLALHLTGDPWIAVVVAAL 70

Query: 75  SGGIFGLLHAGLTVTLGLSQHVSGLGVTLFASSFSYYVFRLLVPVAGTPPTIEPFQPIDV 134
            GG  GL+H  + +    +Q VSGL +T+F    + Y   L  P  GT  T   F P  +
Sbjct: 71  CGGALGLVHGIVCLVFQGNQVVSGLALTIFGVGLADY---LGTPFVGTVTT--GFTPFSL 125

Query: 135 PALSSLPFLGPALFTQTPPTYVAILLALVLGYVLFRTPLGLAIRMTGENPHAAEAQGINP 194
           P L  +P LG   F       ++ +L  +    L RT  GLA+R TGE+P AA A GINP
Sbjct: 126 PVLGDIPVLGEVFFRHDALVNLSYVLPPLFWLFLARTRWGLALRATGEHPAAAAAAGINP 185

Query: 195 MAIRFGSVIVGSALMGIGGAFLTLSAFNSFFPTMVQGRGWICIALVVFASWRPGRALVGA 254
           + +R+ ++  G AL+GIGGA+L+L+  + +   M  GRGWI +ALV+FA WRPGRA++GA
Sbjct: 186 VLVRWAALFAGGALVGIGGAYLSLAYTHLWTNNMTAGRGWIAVALVIFAFWRPGRAVLGA 245

Query: 255 LLFALFDGFQLRLQTRLSGVVPYQIFLMIPYLLSIAALALMARRAR 300
            LF     FQLRLQ  +   VP  + LM+PY L+I  L   + R +
Sbjct: 246 YLFGGVMAFQLRLQA-MGASVPSSLLLMLPYALTIGVLLFSSARGK 290