Pairwise Alignments

Query, 508 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 517 a.a., Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  278 bits (710), Expect = 4e-79
 Identities = 177/490 (36%), Positives = 264/490 (53%), Gaps = 19/490 (3%)

Query: 4   AILNICSVSKRFGDNLANDDISLSLGKGEIVALLGENGAGKTTLMSILFGHYVPDSGKVL 63
           A+L +  + K +   +  D I+L+L +GE++AL GENGAGK+TL  I+ G   P +G++ 
Sbjct: 8   AVLCVSGIGKTYAQPVLTD-INLTLMRGEVLALTGENGAGKSTLSKIIGGLVTPTTGQMQ 66

Query: 64  VEGRELPPGKPRAAIRAGIGMVHQHFSLAPNLTVLENVMAGTERLWHLRSGTSAARRKLH 123
            +G++  PG    A   G+ MV Q  +L P L+V EN+            G   +R++L 
Sbjct: 67  FQGQDYRPGSRTQAEELGVRMVMQELNLLPTLSVAENLFLDNLP----NHGGWISRKQLR 122

Query: 124 RIC----QRFGL-TVEPDARVGDLSVGEQQRVEILKALYNDAHILVLDEPTAVLTNLEAE 178
           +       + GL  ++PD  VG+L +G QQ VEI + L  D H+L+LDEPTA+LT  E E
Sbjct: 123 KAAIEAMAQVGLDAIDPDTLVGELGIGHQQMVEIARNLIGDCHVLILDEPTAMLTAREVE 182

Query: 179 RLFSTLKDMAREGLSLIFISHKLDEVMAAANRIVVLRGGRKVAERLAKETNKAELAELMV 238
            LF  +  +   G+S+I+ISH+L+E+   A RI VLR G  V        N  +L  LMV
Sbjct: 183 MLFEQITRLQARGVSIIYISHRLEELARVAQRIAVLRDGNLVCVEPMANYNSEQLVTLMV 242

Query: 239 GRRVARPVR-EPSTPGEVVLKVADVSVSIDGVERLKSIDFSLRAGEVLGIIGVSGNGQTT 297
           GR +   +   P   G   L V  ++ S    ++++ + F +R+GE+ GI G+ G G+T 
Sbjct: 243 GRELGEHIDLGPRQIGAPALTVKGLTRS----DKVRDVSFEVRSGEIFGISGLIGAGRTE 298

Query: 298 LAHLLSGTLRRDKGDLLLFGEPIGDLTVD---DAVRAGIGRIPEDRNKEGAIGEMAIWEN 354
           L  L+ G    D G + L G P   +++    DAV  GI  I EDR  EG +   +I  N
Sbjct: 299 LLRLIFGADTADSGTVAL-GSPAQVVSIRSPADAVAHGIALITEDRKGEGLLLTQSIAAN 357

Query: 355 AVLERLPRFSRYGLVDRPSGQAFAGQIIDAFDVRGGRPTTRTRLLSGGNMQKLILGRNLM 414
             L  +P  S  GLV+  +  A A + +DA  +R   PT     LSGGN QK+++GR L 
Sbjct: 358 IALGNMPEISSAGLVNGDAELALAQRQVDAMRIRSSSPTQLVSELSGGNQQKVVIGRWLE 417

Query: 415 DRPRILLAAQPARGLDEGAVAAVHERLLEARRAGTAVLLISEDLEEVMALADRIQAIVNG 474
               ++L  +P RG+D GA   ++  L E  R G A++++S DL E+M + DRI  +  G
Sbjct: 418 RDCAVMLFDEPTRGIDVGAKFDIYALLGELTRQGKALVVVSSDLRELMLICDRIGVLSAG 477

Query: 475 RLSPPIAADS 484
           RL      DS
Sbjct: 478 RLIDTFERDS 487



 Score = 70.9 bits (172), Expect = 1e-16
 Identities = 57/234 (24%), Positives = 108/234 (46%), Gaps = 11/234 (4%)

Query: 272 LKSIDFSLRAGEVLGIIGVSGNGQTTLAHLLSGTLRRDKGDLLLFGEPIGDLTVDDAVRA 331
           L  I+ +L  GEVL + G +G G++TL+ ++ G +    G +   G+     +   A   
Sbjct: 24  LTDINLTLMRGEVLALTGENGAGKSTLSKIIGGLVTPTTGQMQFQGQDYRPGSRTQAEEL 83

Query: 332 GIGRIPEDRNKEGAIGEMAIWENAVLERLPRFSRY---GLVDRPSGQAFAGQIIDAFDVR 388
           G+  + ++ N    +  +++ EN  L+ LP    +     + + + +A A   +DA D  
Sbjct: 84  GVRMVMQELN---LLPTLSVAENLFLDNLPNHGGWISRKQLRKAAIEAMAQVGLDAID-- 138

Query: 389 GGRPTTRTRLLSGGNMQKLILGRNLMDRPRILLAAQPARGLDEGAVAAVHERLLEARRAG 448
              P T    L  G+ Q + + RNL+    +L+  +P   L    V  + E++   +  G
Sbjct: 139 ---PDTLVGELGIGHQQMVEIARNLIGDCHVLILDEPTAMLTAREVEMLFEQITRLQARG 195

Query: 449 TAVLLISEDLEEVMALADRIQAIVNGRLSPPIAADSASATKLGLMMAGEWNEEH 502
            +++ IS  LEE+  +A RI  + +G L       + ++ +L  +M G    EH
Sbjct: 196 VSIIYISHRLEELARVAQRIAVLRDGNLVCVEPMANYNSEQLVTLMVGRELGEH 249