Pairwise Alignments

Query, 508 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 500 a.a., ribose import ATP-binding protein RbsA from Vibrio cholerae E7946 ATCC 55056

 Score =  279 bits (713), Expect = 2e-79
 Identities = 163/500 (32%), Positives = 278/500 (55%), Gaps = 23/500 (4%)

Query: 1   MSEAILNICSVSKRFGDNLANDDISLSLGKGEIVALLGENGAGKTTLMSILFGHYVPDSG 60
           M++AIL +  + K F    A D  SL++  G ++AL+GENGAGK+TLM +L G Y  D+G
Sbjct: 1   MTQAILALSQIEKAFPGVKALDKASLNVYPGRVMALMGENGAGKSTLMKVLTGIYSKDAG 60

Query: 61  KVLVEGRELPPGKPRAAIRAGIGMVHQHFSLAPNLTVLENVMAGTER-------LWHLRS 113
            +  +G+ +    PR +  AGI ++HQ  +L P LT+ EN+  G E        LW    
Sbjct: 61  SIEYQGQPVSFKGPRDSQLAGISIIHQELNLIPQLTIAENIFLGREMTSPFGRILW---- 116

Query: 114 GTSAARRKLHRICQRFGLTVEPDARVGDLSVGEQQRVEILKALYNDAHILVLDEPTAVLT 173
                 RK  ++  R  +       +G+LS+GEQQ VEI KAL  ++ ++++DEPT  LT
Sbjct: 117 --DEMHRKADQLLARLNVKHSAKTLLGELSLGEQQMVEIAKALSFESKVIIMDEPTDALT 174

Query: 174 NLEAERLFSTLKDMAREGLSLIFISHKLDEVMAAANRIVVLRGGRKVAERLAKETNKAEL 233
           + E E LF+ + ++  +G  +++ISH+L E+    + I VLR G+ + E    +TN+  L
Sbjct: 175 DTETESLFNVINELREQGCGIVYISHRLKEIFEICDDITVLRDGKFIGECRVCDTNEDGL 234

Query: 234 AELMVGRRVARPVREPSTPGEVVLKVADVSVSIDGV--ERLKSIDFSLRAGEVLGIIGVS 291
            E+MVGR++     E   P  +  +  D+S+ + G+    +  + F+L+ GE+LG+ G+ 
Sbjct: 235 IEMMVGRKL-----EEQYP-RIAAQQGDISLEVIGLTGSGVHDVSFTLKKGEILGVSGLM 288

Query: 292 GNGQTTLAHLLSGTLRRDKGDLLLFGEPIGDLTVDDAVRAGIGRIPEDRNKEGAIGEMAI 351
           G G+T L  ++ G L  ++G + L G  +  ++  D +  GI  I EDR  +G +  +++
Sbjct: 289 GAGRTELMKVIYGALPSERGVINLNGRTVNPVSPQDGLANGIAYISEDRKGDGLVLGLSV 348

Query: 352 WENAVLERLPRFSRYGLVDRPSGQAFA-GQIIDAFDVRGGRPTTRTRLLSGGNMQKLILG 410
            EN  L  L + S+ G+  R + +  A    I  F+++          LSGGN QK+ + 
Sbjct: 349 KENMSLCALDQLSK-GVQIRHADEVIAVDDFIRLFNIKTPSREQIIGNLSGGNQQKVAIA 407

Query: 411 RNLMDRPRILLAAQPARGLDEGAVAAVHERLLEARRAGTAVLLISEDLEEVMALADRIQA 470
           + LM +P++L+  +P RG+D GA   +++ + + +  G +++L+S ++ EV+ ++DRI  
Sbjct: 408 KGLMTKPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILV 467

Query: 471 IVNGRLSPPIAADSASATKL 490
           +  GR+S    A  A   KL
Sbjct: 468 MHEGRISGEFMASEADQEKL 487



 Score = 99.4 bits (246), Expect = 3e-25
 Identities = 68/229 (29%), Positives = 114/229 (49%), Gaps = 10/229 (4%)

Query: 23  DISLSLGKGEIVALLGENGAGKTTLMSILFGHYVPDSGKVLVEGRELPPGKPRAAIRAGI 82
           D+S +L KGEI+ + G  GAG+T LM +++G    + G + + GR + P  P+  +  GI
Sbjct: 271 DVSFTLKKGEILGVSGLMGAGRTELMKVIYGALPSERGVINLNGRTVNPVSPQDGLANGI 330

Query: 83  GMVHQHFS---LAPNLTVLENVMAGTERLWHLRSGTSAARRK----LHRICQRFGL-TVE 134
             + +      L   L+V EN+      L  L  G           +    + F + T  
Sbjct: 331 AYISEDRKGDGLVLGLSVKENMSLCA--LDQLSKGVQIRHADEVIAVDDFIRLFNIKTPS 388

Query: 135 PDARVGDLSVGEQQRVEILKALYNDAHILVLDEPTAVLTNLEAERLFSTLKDMAREGLSL 194
            +  +G+LS G QQ+V I K L     +L+LDEPT  +     + ++  +     EG+S+
Sbjct: 389 REQIIGNLSGGNQQKVAIAKGLMTKPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGMSI 448

Query: 195 IFISHKLDEVMAAANRIVVLRGGRKVAERLAKETNKAELAELMVGRRVA 243
           I +S ++ EV+  ++RI+V+  GR   E +A E ++ +L    VGR  A
Sbjct: 449 ILVSSEMPEVLGMSDRILVMHEGRISGEFMASEADQEKLMACAVGRNPA 497