Pairwise Alignments
Query, 508 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021
Subject, 503 a.a., D-ribose transporter ATP binding protein from Burkholderia phytofirmans PsJN
Score = 284 bits (726), Expect = 6e-81
Identities = 171/493 (34%), Positives = 273/493 (55%), Gaps = 13/493 (2%)
Query: 5 ILNICSVSKRFGDNLANDDISLSLGKGEIVALLGENGAGKTTLMSILFGHYVPDSGKVLV 64
++++ +SKRF A ++ L GE+ AL+GENGAGK+TLM IL G Y D+G++L
Sbjct: 4 LISVKRLSKRFPGVRALHEVQFELVAGEVHALMGENGAGKSTLMKILAGVYTRDTGEILY 63
Query: 65 EGRELPPGKPRAAIRAGIGMVHQHFSLAPNLTVLENVMAGTERLWHLRSGTSAARRKL-- 122
EG+ + PR A G+G++HQ L +LT+ +N+ G E L G KL
Sbjct: 64 EGQPVDFQSPREAQAVGVGIIHQELQLMNHLTIAQNMFIGREPRGRL--GLFLDEDKLNA 121
Query: 123 --HRICQRFGLTVEPDARVGDLSVGEQQRVEILKALYNDAHILVLDEPTAVLTNLEAERL 180
H I R +T++P A V L+V QQ VEI KAL D+ +L++DEPT+ L + E L
Sbjct: 122 QAHDILARMHVTLDPRALVSSLTVARQQMVEIAKALSFDSRVLIMDEPTSALNDAEIAEL 181
Query: 181 FSTLKDMAREGLSLIFISHKLDEVMAAANRIVVLRGGRKVAERLAKETNKAELAELMVGR 240
F ++D+ + G+ +I+ISHK+DE+ A+R+ VLR G VA K+T + +MVGR
Sbjct: 182 FRIIRDLKKRGVGIIYISHKMDELKQIADRVTVLRDGEYVATVAVKDTTVQAIIGMMVGR 241
Query: 241 RV--ARPVREPSTPGEVVLKVADVSVSIDGVERLKSIDFSLRAGEVLGIIGVSGNGQTTL 298
+ A P + + GEV L+V ++ ++ + F+LR GE+LG G+ G G+T +
Sbjct: 242 TLTDAAPSQHIANQGEVALEVTRLNAG----PLVRDVSFALRKGEILGFAGLMGAGRTEV 297
Query: 299 AHLLSGTLRRDKGDLLLFGEPIGDLTVDDAVRAGIGRIPEDRNKEGAIGEMAIWENAVLE 358
A + G + G++++ G DAV GIG + EDR + G M++ N V+
Sbjct: 298 ARAVFGADPIESGEIVVKGVKATIRNPSDAVARGIGYLSEDRKRFGLATGMSVESNIVMS 357
Query: 359 RLPRF-SRYGLVDRPSGQAFAGQIIDAFDVRGGRPTTRTRLLSGGNMQKLILGRNLMDRP 417
L +F S + R + A I+ +R T RLLSGGN QK+++ + L
Sbjct: 358 NLRKFLSLNFFLRRTQIRKTAAHFINLLAIRTPSATQEVRLLSGGNQQKIVIAKWLERDC 417
Query: 418 RILLAAQPARGLDEGAVAAVHERLLEARRAGTAVLLISEDLEEVMALADRIQAIVNGRLS 477
+L +P RG+D GA + +++ L G A+++IS +L E++ ++DRI + GR++
Sbjct: 418 DVLFFDEPTRGIDVGAKSEIYKLLRSLADQGKAIVMISSELPEILRMSDRIVVMCEGRIT 477
Query: 478 PPIAADSASATKL 490
+AA A+ ++
Sbjct: 478 GELAAAGATQERI 490
Score = 91.7 bits (226), Expect = 6e-23
Identities = 66/225 (29%), Positives = 107/225 (47%), Gaps = 7/225 (3%)
Query: 23 DISLSLGKGEIVALLGENGAGKTTLMSILFGHYVPDSGKVLVEGRELPPGKPRAAIRAGI 82
D+S +L KGEI+ G GAG+T + +FG +SG+++V+G + P A+ GI
Sbjct: 273 DVSFALRKGEILGFAGLMGAGRTEVARAVFGADPIESGEIVVKGVKATIRNPSDAVARGI 332
Query: 83 GMVHQ---HFSLAPNLTVLENVMAGTER----LWHLRSGTSAARRKLHRICQRFGLTVEP 135
G + + F LA ++V N++ R L T + H I T
Sbjct: 333 GYLSEDRKRFGLATGMSVESNIVMSNLRKFLSLNFFLRRTQIRKTAAHFINLLAIRTPSA 392
Query: 136 DARVGDLSVGEQQRVEILKALYNDAHILVLDEPTAVLTNLEAERLFSTLKDMAREGLSLI 195
V LS G QQ++ I K L D +L DEPT + ++ L+ +A +G +++
Sbjct: 393 TQEVRLLSGGNQQKIVIAKWLERDCDVLFFDEPTRGIDVGAKSEIYKLLRSLADQGKAIV 452
Query: 196 FISHKLDEVMAAANRIVVLRGGRKVAERLAKETNKAELAELMVGR 240
IS +L E++ ++RIVV+ GR E A + + +L R
Sbjct: 453 MISSELPEILRMSDRIVVMCEGRITGELAAAGATQERIMQLATQR 497
Score = 88.2 bits (217), Expect = 6e-22
Identities = 62/242 (25%), Positives = 115/242 (47%), Gaps = 6/242 (2%)
Query: 256 VLKVADVSVSIDGVERLKSIDFSLRAGEVLGIIGVSGNGQTTLAHLLSGTLRRDKGDLLL 315
++ V +S GV L + F L AGEV ++G +G G++TL +L+G RD G++L
Sbjct: 4 LISVKRLSKRFPGVRALHEVQFELVAGEVHALMGENGAGKSTLMKILAGVYTRDTGEILY 63
Query: 316 FGEPIGDLTVDDAVRAGIGRIPEDRNKEGAIGEMAIWENAVLERLPRFSRYGL-VDRPSG 374
G+P+ + +A G+G I ++ + + I +N + R PR R GL +D
Sbjct: 64 EGQPVDFQSPREAQAVGVGIIHQELQ---LMNHLTIAQNMFIGREPR-GRLGLFLDEDKL 119
Query: 375 QAFAGQIIDAFDVRGGRPTTRTRLLSGGNMQKLILGRNLMDRPRILLAAQPARGLDEGAV 434
A A I+ V P L+ Q + + + L R+L+ +P L++ +
Sbjct: 120 NAQAHDILARMHVTLD-PRALVSSLTVARQQMVEIAKALSFDSRVLIMDEPTSALNDAEI 178
Query: 435 AAVHERLLEARRAGTAVLLISEDLEEVMALADRIQAIVNGRLSPPIAADSASATKLGLMM 494
A + + + ++ G ++ IS ++E+ +ADR+ + +G +A + + MM
Sbjct: 179 AELFRIIRDLKKRGVGIIYISHKMDELKQIADRVTVLRDGEYVATVAVKDTTVQAIIGMM 238
Query: 495 AG 496
G
Sbjct: 239 VG 240