Pairwise Alignments

Query, 328 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 360 a.a., Nucleoside ABC transporter, periplasmic nucleoside-binding protein from Pseudomonas fluorescens FW300-N2E2

 Score =  112 bits (280), Expect = 1e-29
 Identities = 91/313 (29%), Positives = 144/313 (46%), Gaps = 15/313 (4%)

Query: 12  VLASGLVLGVSALAPAVRASAPIKVAGVHASPV-ENAWNSVLHKALQDAAA---EGVIEY 67
           V A GL  G++A      A+ P+KV  V+  P+ ++ W     +  ++ AA   E +   
Sbjct: 14  VAAVGLGAGLNA-----SAADPLKVGFVYIGPIGDHGWTYQHEQGRKELAAKFGEQITTN 68

Query: 68  VFSEGISGTDYPRAMREYAEQGAKLIIGEAYAVEKQAREVAADYPETAFVLGSSGKESGD 127
                  G D  R +R  A+    LI   ++       +VA  +P+  F   ++G +   
Sbjct: 69  YVENVPEGADAERVIRNMAKDKYDLIFTTSFGYMNPTLKVAKQFPKVIFE-HATGYKQDK 127

Query: 128 NFGVFGTWNHDGAYLAGMLAGKMTKSNVVGSVGAMPIPEVNMLINAFAAGVKAVNPDAKH 187
           N G +    ++G Y+ G LA KMTK+  +G V + PIPEV   INA    +   NP ++ 
Sbjct: 128 NLGTYLARTYEGRYVGGFLAAKMTKTKKIGYVASFPIPEVIRDINAIQLALNKYNPGSEI 187

Query: 188 LVTFIGTFFDPPKAREAGLAQIDAGADILFGERIGTA--DAAKERGLKSVGSLIDYTPRY 245
            V ++ ++FDP K  +A  A ID G D++F      A   AA+ RG+ +VG   D     
Sbjct: 188 KVVWVNSWFDPGKEADAANALIDQGVDVVFQHTDSPAPIQAAERRGVYAVGYASDMAHFG 247

Query: 246 PDTVFANALWGFRPILNAAIADVSAGKPVGKDYTAFGLLKEGGSDVAYVKGVAPADAEAA 305
           P  V  + +  + P    A   V       +DY  +G LKEG   +  +  + PA  +  
Sbjct: 248 PKAVLTSIVNDWGPHYIQATQSVLDHNWKSQDY--WGGLKEGTVKLP-ISDLVPAAVKGE 304

Query: 306 MEAKRAEIKSGAF 318
            E   A+I+SG F
Sbjct: 305 AEQIIADIESGTF 317