Pairwise Alignments

Query, 328 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 360 a.a., Nucleoside ABC transporter, periplasmic nucleoside-binding protein from Pseudomonas fluorescens FW300-N1B4

 Score =  115 bits (288), Expect = 2e-30
 Identities = 91/312 (29%), Positives = 143/312 (45%), Gaps = 11/312 (3%)

Query: 14  ASGLVLGVSALAPAVRASAPIKVAGVHASPV-ENAW---NSVLHKALQDAAAEGVIEYVF 69
           A    +G+SA + A  A+ P+KV  V+  P+ ++ W   +    K L +   E +     
Sbjct: 12  AVAAAIGLSA-SLAASAADPLKVGFVYIGPIGDHGWTYQHEQGRKVLAEKFGEQITTNYV 70

Query: 70  SEGISGTDYPRAMREYAEQGAKLIIGEAYAVEKQAREVAADYPETAFVLGSSGKESGDNF 129
                G D  R +R  A+    LI   ++       +VA  +P+  F   ++G +   N 
Sbjct: 71  ENVAEGADAERVIRNMAKDKYDLIFTTSFGYMNPTLKVAKQFPKVTFE-HATGYKQDKNL 129

Query: 130 GVFGTWNHDGAYLAGMLAGKMTKSNVVGSVGAMPIPEVNMLINAFAAGVKAVNPDAKHLV 189
           G +    ++G Y+ G LA KMTK+  VG V + PIPEV   INA    +   NP  +  V
Sbjct: 130 GTYLARTYEGRYVGGFLAAKMTKTKKVGYVASFPIPEVIRDINAIQLALNKYNPGTEIKV 189

Query: 190 TFIGTFFDPPKAREAGLAQIDAGADILFGERIGTA--DAAKERGLKSVGSLIDYTPRYPD 247
            ++ ++FDP K  +A  A ID G D++F      A   AA+ RG+ +VG   D     P 
Sbjct: 190 VWVNSWFDPGKEADAANALIDQGVDVVFQHTDSPAPIQAAERRGVYAVGYASDMAHFGPK 249

Query: 248 TVFANALWGFRPILNAAIADVSAGKPVGKDYTAFGLLKEGGSDVAYVKGVAPADAEAAME 307
            V  + +  + P    A   V       +DY  +G LKEG  ++  +  + PA  +   E
Sbjct: 250 AVLTSIVNDWGPHYIQATQSVLGHTWKSQDY--WGGLKEGTVELP-ISDLVPAAVKTEAE 306

Query: 308 AKRAEIKSGAFE 319
              A+IKSG  +
Sbjct: 307 QIIADIKSGTLQ 318