Pairwise Alignments

Query, 369 a.a., DNA polymerase IV from Sinorhizobium meliloti 1021

Subject, 390 a.a., DNA polymerase IV (EC 2.7.7.7) from Pseudomonas fluorescens FW300-N2E2

 Score =  266 bits (679), Expect = 9e-76
 Identities = 156/337 (46%), Positives = 207/337 (61%), Gaps = 10/337 (2%)

Query: 17  RKIIHIDMDAFYASVEQRDNPELRGKPVAVG-YPEARGVVAAASYEARKFGVHSAMPSVT 75
           RKIIH+D D FYA++E RD+P L GKP+AVG   + RGV+A  +YEAR +GV SAM S  
Sbjct: 41  RKIIHVDCDCFYAAIEMRDDPRLAGKPLAVGGSADRRGVIATCNYEARAYGVRSAMSSGH 100

Query: 76  AKRKCPELIFVPHRFDVYRAVSRQIQAIFAEYTPLVEPLSLDEAYLDVTENFRGLKLATE 135
           A + CP+L  V  R D YR  S++I  IF++YT L+EPLSLDEAYLDV+ +      AT 
Sbjct: 101 ALKLCPDLTIVKPRMDAYREASKEIHTIFSDYTDLIEPLSLDEAYLDVSASAHFGGSATR 160

Query: 136 IAEEIRGRIRAETHLTASAGVSYNKFLAKMASDQRKPDGLFVITPKHGPDFVQALPVKKF 195
           IA++IR R+  + H+T SAGV+ NKFLAK+ASD +KP+GLFVITP    DFV ALPV K 
Sbjct: 161 IAQDIRRRVSNQLHITVSAGVAPNKFLAKIASDWKKPNGLFVITPDQVEDFVSALPVSKL 220

Query: 196 HGVGPATAEKMKRLGIETGADLKSRDLAFLQQHFGKSGPYFYWIARGIDERKVKPDRIRK 255
           HGVG  TA+K+ RLGI     L+  D   L + FG  G   + +ARGIDER V  D  R+
Sbjct: 221 HGVGKVTADKLNRLGIVDCLQLRQWDKLALVREFGSFGERLWSLARGIDERLVHNDSRRQ 280

Query: 256 SIGAEDTFREDVHDLETARAGLKPLIDKV---WHYCEASGIRGKTMTLKVKWADFTQITR 312
           SI  E+T+  D+ DL +    L  L++ +       ++S   GK   +KVK+ DFTQ T 
Sbjct: 281 SISVENTYDVDLPDLVSCLDKLPELMETLSGRMARIDSSYRPGKPF-VKVKFHDFTQTTL 339

Query: 313 SKTIVAPIASVAEMSEIAELLLSPIFPAPKGIRLLGV 349
            +       +  ++     LL        K +RLLG+
Sbjct: 340 EQA-----GAGRDLGSYQLLLTQAFNRGGKPVRLLGI 371