Pairwise Alignments

Query, 369 a.a., DNA polymerase IV from Sinorhizobium meliloti 1021

Subject, 354 a.a., Nucleotidyltransferase/DNA polymerase involved in DNA repair from Pseudomonas stutzeri RCH2

 Score =  264 bits (674), Expect = 3e-75
 Identities = 157/346 (45%), Positives = 213/346 (61%), Gaps = 14/346 (4%)

Query: 16  VRKIIHIDMDAFYASVEQRDNPELRGKPVAVG-YPEARGVVAAASYEARKFGVHSAMPSV 74
           +RKIIHID D FYA++E RD+P L  +P+AVG   + RGV+A  +YEAR +GV SAM S 
Sbjct: 6   LRKIIHIDCDCFYAAIEMRDDPSLARRPIAVGGAADRRGVIATCNYEARAYGVRSAMASG 65

Query: 75  TAKRKCPELIFVPHRFDVYRAVSRQIQAIFAEYTPLVEPLSLDEAYLDVT--ENFRGLKL 132
            A + CP+L+ +  R + YR  SR+IQ IF  YT L+EPLSLDEAYLDVT  E+F G   
Sbjct: 66  HALKLCPDLLILRPRMEAYREASREIQNIFRTYTELIEPLSLDEAYLDVTACEHFSGS-- 123

Query: 133 ATEIAEEIRGRIRAETHLTASAGVSYNKFLAKMASDQRKPDGLFVITPKHGPDFVQALPV 192
           AT IAE+IR R+  +  +T SAGV+ NKFLAK+AS+  KPDGLFVITP    +FVQ L V
Sbjct: 124 ATRIAEDIRRRVWQQLRITVSAGVAPNKFLAKIASEWNKPDGLFVITPAQVDEFVQELEV 183

Query: 193 KKFHGVGPATAEKMKRLGIETGADLKSRDLAFLQQHFGKSGPYFYWIARGIDERKVKPDR 252
           K+ HGVG  TAEK+ RLGI T  DL+      L + FG  G   + +ARGIDER V+ + 
Sbjct: 184 KRLHGVGRVTAEKLARLGIHTCNDLREWGRLALVREFGAFGERLWGLARGIDERPVQVEN 243

Query: 253 IRKSIGAEDTFREDVHDLETARAGLKPLIDKV---WHYCEASGIRGKTMTLKVKWADFTQ 309
            R+S+  E T+  D+ DL      L  L+ ++       + S   GK   +K+K+ DFTQ
Sbjct: 244 RRQSVSVEQTYDRDLPDLAACLERLPELLQQLATRMARLDGSYRPGKPF-VKLKFHDFTQ 302

Query: 310 ITRSKTIVAPIASVAEMSEIAELLLSPIFPAPKGIRLLGVTLSSLD 355
            T  +       +  E+ + ++LL        + +RL+GV +  +D
Sbjct: 303 TTLEQA-----GAGLELDDYSDLLAIAFSRGARPVRLIGVGVRLID 343