Pairwise Alignments

Query, 369 a.a., DNA polymerase IV from Sinorhizobium meliloti 1021

Subject, 354 a.a., DNA-directed DNA polymerase from Pseudomonas syringae pv. syringae B728a

 Score =  270 bits (690), Expect = 4e-77
 Identities = 156/337 (46%), Positives = 208/337 (61%), Gaps = 10/337 (2%)

Query: 17  RKIIHIDMDAFYASVEQRDNPELRGKPVAVG-YPEARGVVAAASYEARKFGVHSAMPSVT 75
           RKIIHID D FYA++E RD P+L GKP+AVG   E RGV+A  +YEAR +GV SAM S  
Sbjct: 4   RKIIHIDCDCFYAAIEMRDEPDLAGKPLAVGGSAERRGVIATCNYEARAYGVRSAMSSRH 63

Query: 76  AKRKCPELIFVPHRFDVYRAVSRQIQAIFAEYTPLVEPLSLDEAYLDVTENFRGLKLATE 135
           A + CP+L  V  R D Y+  SR+I  IF +YT L+EPLSLDEA+LDV+E       AT 
Sbjct: 64  ALKLCPDLTIVKPRMDAYKEASREIHTIFRDYTDLIEPLSLDEAFLDVSEAGHFSGSATR 123

Query: 136 IAEEIRGRIRAETHLTASAGVSYNKFLAKMASDQRKPDGLFVITPKHGPDFVQALPVKKF 195
           IA++IR R+  + H+T SAGV+ NKFLAK+ASD +KP+GLFVITP    +FV +LPV K 
Sbjct: 124 IAQDIRRRVSNQLHITVSAGVAPNKFLAKIASDWKKPNGLFVITPDQVEEFVASLPVTKL 183

Query: 196 HGVGPATAEKMKRLGIETGADLKSRDLAFLQQHFGKSGPYFYWIARGIDERKVKPDRIRK 255
           HGVG  TA+K+ RLGI   ADL+SR    L + FG  G   + +A GID+R V+ D  R+
Sbjct: 184 HGVGKVTADKLGRLGIVDCADLRSRSKLALVREFGSFGERLWSLAHGIDDRPVQNDSRRQ 243

Query: 256 SIGAEDTFREDVHDLETARAGLKPLIDKV---WHYCEASGIRGKTMTLKVKWADFTQITR 312
           S+  E+T+  D+ DL      L  L++ +       E     GK   +KVK+ DFTQ T 
Sbjct: 244 SVSVENTYDTDLPDLAACLEKLPDLLETLSGRMARMEGQYRPGKPF-VKVKFHDFTQTTL 302

Query: 313 SKTIVAPIASVAEMSEIAELLLSPIFPAPKGIRLLGV 349
            ++      +  ++    +LL        K +RLLG+
Sbjct: 303 EQS-----GAGRDLGSYEQLLAQAFARGGKPVRLLGI 334