Pairwise Alignments

Query, 369 a.a., DNA polymerase IV from Sinorhizobium meliloti 1021

Subject, 420 a.a., Y-family DNA polymerase from Synechocystis sp000284455 PCC 6803

 Score = 78.6 bits (192), Expect = 3e-19
 Identities = 81/352 (23%), Positives = 148/352 (42%), Gaps = 17/352 (4%)

Query: 16  VRKIIHIDMDAFYASVEQRDNPELRGKPVAVGYPEARGVVAAASYEARKFGVHSAMPSVT 75
           +  I  +D + FY S E+   P L GKPV V      G V A S EA+  G+   +P   
Sbjct: 1   MNSIALVDCNNFYVSCERVFQPLLNGKPVVV-LSNNDGCVVARSSEAKALGIKMGVPLFK 59

Query: 76  AKRKCPE--LIFVPHRFDVYRAVSRQIQAIFAEYTPLVEPLSLDEAYLDVTENFRGLKLA 133
            +       +      + +Y  +S +I      ++P+VE  S+DEA+L++T N    +  
Sbjct: 60  IRDLVERHNIQVFSSNYCLYGDLSHRIMTSLQLFSPVVEIYSIDEAFLELTPN----QSN 115

Query: 134 TEIAEEIRGRIRAETHLTASAGVSYNKFLAKMASDQRKPD--GLFVITPKHGPDFVQA-L 190
           T   EEIR  ++    +  S G++  K LAK+A+D  K    G F +      D + A +
Sbjct: 116 TNYGEEIRRCLKQWVGIPVSIGIAPTKVLAKVATDVAKQSGAGTFCLDKAEAADTILATM 175

Query: 191 PVKKFHGVGPATAEKMKRLGIETGADLKSRDLAFLQQHFGKSGPYFYWIARGID--ERKV 248
           P+    G+G    +     G+ T    K  +   +++  G  G       +GI     ++
Sbjct: 176 PIADIWGIGRRLEKWFTTRGVSTALQFKQANPELIRKKMGVVGQRLLLELQGISCLPLEL 235

Query: 249 KPDRIRKSIGAEDTFREDVHDLETARAGLKPLIDKVWHYCEASGIRGKTMTLKVKWADFT 308
            P+  ++      +F + V  L+  +  +   + +              M +  + + F 
Sbjct: 236 IPNP-KQETCVSRSFAQAVTTLDELQTAIAFFVSRAAEKLRRQQQTPAVMIIFARTSFFI 294

Query: 309 Q--ITRSKTIVAPIAS--VAEMSEIAELLLSPIFPAPKGIRLLGVTLSSLDT 356
           +  I+ S+TI  P  +    E+ ++A+  L  IF      +  GV ++ L +
Sbjct: 295 EQPISISQTIALPTPTHYTPELLKLAQTSLKQIFRPHHPYKKAGVIMTGLQS 346