Pairwise Alignments

Query, 369 a.a., DNA polymerase IV from Sinorhizobium meliloti 1021

Subject, 355 a.a., DNA polymerase IV (RefSeq) from Shewanella amazonensis SB2B

 Score =  266 bits (679), Expect = 8e-76
 Identities = 166/361 (45%), Positives = 215/361 (59%), Gaps = 13/361 (3%)

Query: 16  VRKIIHIDMDAFYASVEQRDNPELRGKPVAVG-YPEARGVVAAASYEARKFGVHSAMPSV 74
           +RKIIHIDMD ++A+VE RD P+ RGKP+AVG   + RGV++  +YEAR FGV SAM S 
Sbjct: 1   MRKIIHIDMDCYFAAVEMRDFPQYRGKPLAVGGSSDRRGVISTCNYEARAFGVRSAMASA 60

Query: 75  TAKRKCPELIFVPHRFDVYRAVSRQIQAIFAEYTPLVEPLSLDEAYLDVTENFRGLKLAT 134
            A + CP LI VP R +VY+AVS+QI+ IF+ YT L+EPLSLDEAYLDV++       AT
Sbjct: 61  YALKLCPNLILVPGRMEVYKAVSQQIREIFSRYTSLIEPLSLDEAYLDVSDCSLYQGSAT 120

Query: 135 EIAEEIRGRIRAETHLTASAGVSYNKFLAKMASDQRKPDGLFVITPKHGPDFVQALPVKK 194
            IAE IR  I  ET LTASAGVS  KF+AK+ASD  KP+G +V++P     FV+AL + K
Sbjct: 121 RIAEAIRSDIFKETGLTASAGVSPIKFVAKVASDLNKPNGQYVVSPDTLMHFVRALSLGK 180

Query: 195 FHGVGPATAEKMKRLGIETGADLKSRDLAFLQQHFGKSGPYFYWIARGIDERKVKPDRIR 254
             GVG  T EK+  LG++T AD++      L +HFGK G   Y  A G DER +   R R
Sbjct: 181 IPGVGKVTEEKLNALGLKTCADVQQVPQTLLTEHFGKFGAVLYERAHGRDERAIVSHRER 240

Query: 255 KSIGAEDTFREDVHDLETARAGLKPLIDKVWHYC--EASGIRGKTMTLKVKWADFTQITR 312
           KS+G E T  +D+H  E     L  LI ++       ASG R   + +K+K+ DF Q T 
Sbjct: 241 KSVGVETTLPKDLHTREACLDVLSSLIPELNRRLGRSASGRRIHKLVVKLKFDDFRQTTI 300

Query: 313 SKTIVAPIASVAEMSEIAELLLSPIF--PAPKGIRLLGVT--LSSLDTVDDRSEPQLALA 368
                 P         + E LLS  F     +GIRL+G+   L      +     QLAL+
Sbjct: 301 ESRAEEPSV------RLFESLLSQAFVRAEGRGIRLVGIAAGLVCRSEAEQEGSAQLALS 354

Query: 369 L 369
           L
Sbjct: 355 L 355