Pairwise Alignments

Query, 369 a.a., DNA polymerase IV from Sinorhizobium meliloti 1021

Subject, 421 a.a., DNA-directed DNA polymerase (NCBI) from Rhodospirillum rubrum S1H

 Score =  240 bits (613), Expect = 4e-68
 Identities = 144/355 (40%), Positives = 190/355 (53%), Gaps = 2/355 (0%)

Query: 12  PGGRVRKIIHIDMDAFYASVEQRDNPELRGKPVAVGYPEARGVVAAASYEARKFGVHSAM 71
           PG  +  I HID DAFYASVE+RDNP LR +P+ VG+P  RGV   A Y AR+FG  SAM
Sbjct: 31  PGLALLDIAHIDCDAFYASVEKRDNPSLRDRPLIVGHPGGRGVATTACYIARRFGARSAM 90

Query: 72  PSVTAKRKCPELIFVPHRFDVYRAVSRQIQAIFAEYTPLVEPLSLDEAYLDVTENFRGLK 131
           P       CPE + +P     Y+AVS Q++AI  E T  +EPLSLDEAYLD++E      
Sbjct: 91  PMFKCLELCPEAVVIPPDMAKYKAVSAQVRAIMLEATHRLEPLSLDEAYLDLSEGEHRFA 150

Query: 132 LATEIA-EEIRGRIRAETHLTASAGVSYNKFLAKMASDQRKPDGLFVITPKHGPDFVQAL 190
               ++   I  R+  E  +T S G+S N+FLAK+ASD  KP G  VI     P  +  +
Sbjct: 151 RPPAVSLATIARRVEREIGITVSIGLSSNRFLAKLASDMNKPQGFTVIDEAEAPALLAPM 210

Query: 191 PVKKFHGVGPATAEKMKRLGIETGADLKSRDLAFLQQHFGKSGPYFYWIARGIDERKVKP 250
           PVK+ HGVG AT  ++  LG+ T  DL+ R  A L   FGK G   +  A G   R + P
Sbjct: 211 PVKRLHGVGAATERRLAELGLHTIGDLQGRPEADLLARFGKIGRALHAHAWGRGGRTISP 270

Query: 251 DRIRKSIGAEDTFREDVHDLETARAGLKPLIDKVWHYCEASGIRGKTMTLKVKWADFTQI 310
           DR  KSI AE TF  D+  L      L PL ++V      + + G T+ LK+K  DF  +
Sbjct: 271 DRETKSISAETTFERDLSRLPDLARALGPLSERVARALTRNALAGATVVLKLKTHDFRIL 330

Query: 311 TRSKTIVAPIASVAEMSEIAELLLSPIFPAPKGIRLLGVTLSSLDTVDDRSEPQL 365
           TR   +  P A    ++  A  LL       +  RL+GV ++ L    +   P L
Sbjct: 331 TRHARLGDPTARAEVIAGAARRLLERETDG-RRFRLIGVGMADLRPGSEADPPDL 384