Pairwise Alignments

Query, 369 a.a., DNA polymerase IV from Sinorhizobium meliloti 1021

Subject, 359 a.a., DNA polymerase IV (RefSeq) from Shewanella loihica PV-4

 Score =  263 bits (671), Expect = 7e-75
 Identities = 157/339 (46%), Positives = 214/339 (63%), Gaps = 7/339 (2%)

Query: 16  VRKIIHIDMDAFYASVEQRDNPELRGKPVAVG-YPEARGVVAAASYEARKFGVHSAMPSV 74
           ++KIIH+DMD F+A+VE RD PELRGKP+AVG   + RGV++  +YEARKFGV SAM S 
Sbjct: 1   MKKIIHVDMDCFFAAVEMRDFPELRGKPIAVGGRSDRRGVISTCNYEARKFGVRSAMASA 60

Query: 75  TAKRKCPELIFVPHRFDVYRAVSRQIQAIFAEYTPLVEPLSLDEAYLDVTENFRGLKLAT 134
            A + CP+LI VP R  VY+ VS QI+ +FA YT L+EPLSLDEAYLDV++  +    AT
Sbjct: 61  YALKLCPDLILVPGRMSVYKEVSAQIREVFARYTELIEPLSLDEAYLDVSDCTQHQGSAT 120

Query: 135 EIAEEIRGRIRAETHLTASAGVSYNKFLAKMASDQRKPDGLFVITPKHGPDFVQALPVKK 194
            IAE IR  I   T LTASAG++  KFLAK+ASD  KP+G +VITP+  P+FV+ L + K
Sbjct: 121 LIAEAIRREIFEVTGLTASAGIAPVKFLAKIASDLNKPNGQYVITPQMIPEFVKTLALIK 180

Query: 195 FHGVGPATAEKMKRLGIETGADLKSRDLAFLQQHFGKSGPYFYWIARGIDERKVKPDRIR 254
             GVG  TA K++ +G+ T AD+++     L + FGK G   Y  A+GID R + P R R
Sbjct: 181 IPGVGKVTAAKLETMGLITCADVQACSRQSLMERFGKFGGVLYDRAQGIDPRGISPHRER 240

Query: 255 KSIGAEDTFREDVHDLETARAGLKPLIDKVWHYC--EASGIRGKTMTLKVKWADFTQITR 312
           KS+G E T  +D++  E  +A +  LI ++       A   R     +K+K+ DF Q T 
Sbjct: 241 KSVGVETTLAKDIYTYEQCQAVMPQLIQELSGRISRSAKSRRIHKQVVKLKFDDFKQTTI 300

Query: 313 SKTIVAPIASVAEMSEIAELLLSPIFPAPKGIRLLGVTL 351
            +   +   SV    ++ +  L     A +GIRLLGV++
Sbjct: 301 EQR--SDEVSVKLFYDLLKQALER--RAGRGIRLLGVSV 335