Pairwise Alignments

Query, 369 a.a., DNA polymerase IV from Sinorhizobium meliloti 1021

Subject, 346 a.a., Possible DNA-damage-inducible protein P DinP (DNA polymerase V) (pol IV 2) (DNA nucleotidyltransferase (DNA-directed)) from Mycobacterium tuberculosis H37Rv

 Score =  155 bits (392), Expect = 2e-42
 Identities = 114/345 (33%), Positives = 168/345 (48%), Gaps = 8/345 (2%)

Query: 12  PGGRVRKIIHIDMDAFYASVEQRDNPELRGKPVAVGY----PEARGVVAAASYEARKFGV 67
           P    R I+H+D+D F ASVE   +PEL G PV VG      E R VV  ASYEAR +GV
Sbjct: 2   PTAAPRWILHVDLDQFLASVELLRHPELAGLPVIVGGNGDPTEPRKVVTCASYEARAYGV 61

Query: 68  HSAMPSVTAKRKCPELIFVPHRFDVYRAVSRQIQAIFAEYTPLVEPLSLDEAYLDVTENF 127
            + MP  TA R+CPE  F+P     Y A S ++ A+  +    VE    DEAYL V    
Sbjct: 62  RAGMPLRTAARRCPEATFLPSNPAAYNAASEEVVALLRDLGYPVEVWGWDEAYLAVAPGT 121

Query: 128 RGLKLATEIAEEIRGRIRAETHLTASAGVSYNKFLAKMASDQRKPDGLFVITPKHGPDFV 187
               +  E+AEEIR  I ++T L+ S G+S NK  AK+A+   KP G++ +T  +    +
Sbjct: 122 PDDPI--EVAEEIRKVILSQTGLSCSIGISDNKQRAKIATGLAKPAGIYQLTDANWMAIM 179

Query: 188 QALPVKKFHGVGPATAEKMKRLGIETGADLKSRDLAFLQQHFGKSGPYFYWIARGIDERK 247
               V+   GVGP T +++ +LGI T   L   D   L   FG     +  +A+G  + +
Sbjct: 180 GDRTVEALWGVGPKTTKRLAKLGINTVYQLAHTDSGLLMSTFGPRTALWLLLAKGGGDTE 239

Query: 248 VKPDR-IRKSIGAEDTFREDVHDLETARAGLKPLIDKVWHYCEASGIRGKTMTLKVKWAD 306
           V     + +S     TF  D+       + +  L  +  +   AS      + + V+ A 
Sbjct: 240 VSAQAWVPRSRSHAVTFPRDLTCRSEMESAVTELAQRTLNEVVASSRTVTRVAVTVRTAT 299

Query: 307 FTQITRSKTIVAPIASVAEMSEIAELLLSPIFPAPKGIRLLGVTL 351
           F   T+ + + AP      ++  A  +L  +F   + +RLLGV L
Sbjct: 300 FYTRTKIRKLQAPSTDPDVITAAARHVLD-LFELDRPVRLLGVRL 343