Pairwise Alignments

Query, 369 a.a., DNA polymerase IV from Sinorhizobium meliloti 1021

Subject, 497 a.a., DNA-directed DNA polymerase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 84.0 bits (206), Expect = 8e-21
 Identities = 98/386 (25%), Positives = 162/386 (41%), Gaps = 32/386 (8%)

Query: 9   PPSPGGRVRKIIHIDMDAFYASVEQRDNPELRGKPVAVGYPEARGVVAAASYEARKFGVH 68
           P SPG  ++    +D + FYAS E+   P+LRGKP+ V      G + + S EA+  GV 
Sbjct: 52  PGSPGPLLQPWALVDCNNFYASCERLFRPDLRGKPIVV-LSNNDGCIISRSDEAKALGVE 110

Query: 69  SAMPSVTAKRKCPEL---IFVPHRFDVYRAVSRQIQAIFAEYTPLVEPLSLDEAYLDVTE 125
              P+   +R+   L   +F    + +Y  +S ++       +P V+  S+DEA+L +  
Sbjct: 111 MGAPAFKVRRELARLGVHVF-SSNYALYGDLSSRVMRTLGTLSPEVDVYSIDEAFLPL-- 167

Query: 126 NFRGLKLATEIA--EEIRGRIRAETHLTASAGVSYNKFLAKMAS--DQRKP--DGLFVIT 179
             RG   A  +A    +R R+   T +  S G++  + LAK+A    +R P  +G+F + 
Sbjct: 168 --RGPLAADPVAVGRALRERVARWTGIPISVGIAPTRTLAKIAGRVAKRTPRCEGVFDLA 225

Query: 180 PKHG------PDFVQALPVKKFHGVGPATAEKMKRLGIETGADLKSRDLAFLQQHFGKSG 233
                      D + +LPV+   GVG   A  ++  GI T   L+     ++++    +G
Sbjct: 226 RSREVLGMSVDDLLGSLPVESVWGVGRRLAGMLRGAGIATARALRDAGDDWVRRRMSVTG 285

Query: 234 PYFYWIARGID----ERKVKPDRIRKSIGAEDTFREDVHDLETARAGLKPLIDKVWHYCE 289
                  RG+     E + +P   R ++ +  +F   + D+   R  L            
Sbjct: 286 LRTVLELRGLPCIGAEEQGEPPSPRHTVVSSRSFAGRIADVAMLREALATHAALAGAKLR 345

Query: 290 ASGIRGKTMTLKVKWA--DFTQITRSKTIVA-----PIASVAEMSEIAELLLSPIFPAPK 342
            +G+    + + V+ A  D     R    VA     P A  A    +A   L  +F    
Sbjct: 346 RAGLVAGGLAVHVRTARHDEQAALRCDDSVALPLPVPTADSAVFIRLAHEGLDRVFRPGY 405

Query: 343 GIRLLGVTLSSLDTVDDRSEPQLALA 368
                GV L  L+  D R    LALA
Sbjct: 406 PYAKAGVMLYGLERADTRQGSLLALA 431