Pairwise Alignments

Query, 369 a.a., DNA polymerase IV from Sinorhizobium meliloti 1021

Subject, 354 a.a., DNA polymerase IV from Marinobacter adhaerens HP15

 Score =  248 bits (634), Expect = 1e-70
 Identities = 149/353 (42%), Positives = 205/353 (58%), Gaps = 6/353 (1%)

Query: 17  RKIIHIDMDAFYASVEQRDNPELRGKPVAVGYPEARGVVAAASYEARKFGVHSAMPSVTA 76
           RKIIH+D D FYA+VE RD+P LR  P+AVG    RGVV   +Y+AR +GV SAMP   A
Sbjct: 4   RKIIHVDCDCFYAAVEMRDDPSLRDVPLAVGGDGGRGVVTTCNYKARAYGVRSAMPGSEA 63

Query: 77  KRKCPELIFVPHRFDVYRAVSRQIQAIFAEYTPLVEPLSLDEAYLDVTENFRGLKLATEI 136
           +R CP L+ VP     YRAVS+Q+ AI  E T LVEPLSLDEA+LDV++       AT +
Sbjct: 64  RRLCPGLVMVPTDMGRYRAVSQQVMAILRELTDLVEPLSLDEAFLDVSDVTDHKGSATLM 123

Query: 137 AEEIRGRIRAETHLTASAGVSYNKFLAKMASDQRKPDGLFVITPKHGPDFVQALPVKKFH 196
           A  +R R+R E  +T SAGV+ NKFLAK+ASD  KPDGLFVI P+   DFV+ LPV+K  
Sbjct: 124 ARHLRERVRQEVGITISAGVAPNKFLAKIASDWEKPDGLFVIRPEDVADFVRGLPVEKLF 183

Query: 197 GVGPATAEKMKRLGIETGADLKSRDLAFLQQHFGKSGPYFYWIARGIDERKVKPDRIRKS 256
           GVG  TA K+  LG++T  D+++     L + FGK G   + +A G DER V   RI KS
Sbjct: 184 GVGQVTASKLHALGVKTCGDMQALGPDVLIERFGKQGYRLHEMAHGRDERAVVVSRIAKS 243

Query: 257 IGAEDTFREDVHDLETARAGLKPLIDKVWHYCEASGIRG--KTMTLKVKWADFTQITRSK 314
           +  E TF +D+ D+   +  +  L+  +         R     + +K++++DF+  T  +
Sbjct: 244 VSVERTFSQDLPDMTACQTVMASLVADLNLRLSRKARRKPIHKLFIKIRYSDFSTHTLER 303

Query: 315 TIVAPIASVAEMSEIAELLLSPIFPAPKGIRLLGVTLSSLDTVDDRSEPQLAL 367
             V        + +   LL   +    + +RLLG+ +   +  DD    QL L
Sbjct: 304 --VREQVKEPALDDYLPLLAELVTNRERPVRLLGLGVRFRN--DDAPVTQLRL 352