Pairwise Alignments

Query, 369 a.a., DNA polymerase IV from Sinorhizobium meliloti 1021

Subject, 418 a.a., umuC protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 77.8 bits (190), Expect = 5e-19
 Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 8/215 (3%)

Query: 22  IDMDAFYASVEQRDNPELRGKPVAVGYPEARGVVAAASYEARKFGVHSAMPSVTAKRKCP 81
           +D ++FY S EQ   P+ RGKPV V      G+V AA+ +A++ G+   +P    +  C 
Sbjct: 5   VDANSFYCSCEQVFRPDWRGKPVVV-LSNNDGMVVAANRQAKEAGIPKFVPYFQIRDLCQ 63

Query: 82  E--LIFVPHRFDVYRAVSRQIQAIFAEYTPLVEPLSLDEAYLDVTENFRGLKLATEIAEE 139
           +  +I +   +++Y  +S ++  I   + P     S+DE++L  T  +  +      A+ 
Sbjct: 64  KKGVIALSSNYELYADLSAKMMQIIGRFAPEQYVYSIDESFLSFTRCYPAITCLKTQAQA 123

Query: 140 IRGRIRAETHLTASAGVSYNKFLAKMASDQRKP----DGLFVI-TPKHGPDFVQALPVKK 194
           IR  +  E  L    G+     LAK+A+   K      G+ VI +       +Q +PV +
Sbjct: 124 IRRAVWKEARLPVCVGIGSTLTLAKIANHAAKKISGYAGVCVIESEPQRLAILQQMPVGE 183

Query: 195 FHGVGPATAEKMKRLGIETGADLKSRDLAFLQQHF 229
             G+G   + K+  +GI T A L +      ++ F
Sbjct: 184 VWGIGRRLSAKLTLMGITTAAQLAAMPPGLARKQF 218