Pairwise Alignments

Query, 369 a.a., DNA polymerase IV from Sinorhizobium meliloti 1021

Subject, 386 a.a., DNA polymerase IV (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  263 bits (672), Expect = 6e-75
 Identities = 149/334 (44%), Positives = 207/334 (61%), Gaps = 2/334 (0%)

Query: 20  IHIDMDAFYASVEQRDNPELRGKPVAVGYPEARGVVAAASYEARKFGVHSAMPSVTAKRK 79
           +HIDMDAF+ASVEQ D+P LRG+PV VG    RGVV+AASYEAR++GV SAMP+VTA+R 
Sbjct: 1   MHIDMDAFFASVEQLDDPSLRGRPVIVGGSSERGVVSAASYEARRYGVRSAMPTVTARRL 60

Query: 80  CPELIFVPHRFDVYRAVSRQIQAIFAEYTPLVEPLSLDEAYLDVTENFRGLKLATEIAEE 139
           CP  +FV  R   Y  VSR + A+  +++P+VE  S+DEAYLD T   R      E+A+ 
Sbjct: 61  CPHGVFVSGRRHRYAEVSRMVMAVLHDFSPVVEQASVDEAYLDATGLERLFGPVDEMAQR 120

Query: 140 IRGRIRAET-HLTASAGVSYNKFLAKMASDQRKPDGLFVITPKHGPDFVQALPVKKFHGV 198
           ++GR+R  T  LT S G++  KFLAK+ASD  KPDG+F++ P+    F+  LPV +  GV
Sbjct: 121 LKGRVREATGGLTCSVGLAPVKFLAKIASDVNKPDGVFILPPEDVAAFLATLPVGRIPGV 180

Query: 199 GPATAEKMKRLGIETGADLKSRDLAFLQQHFGKSGPYFYWIARGIDERKVKPDRIRKSIG 258
           G    E +  LG+ T  D+    ++F ++ FGK G   Y  ARGID R ++P    KS  
Sbjct: 181 GKRMLESLDLLGVRTAGDVLRHPVSFWERRFGKGGLVLYDRARGIDPRPLEPWTPPKSES 240

Query: 259 AEDTFREDVHDLETARAGLKPLIDKVWHYCEASGIRGKTMTLKVKWADFTQITRSKTIVA 318
           AE T   D  D    R  L    ++V       G+ G+T+TLKVK+ADF Q+TRS+T+  
Sbjct: 241 AEVTLAADTADRAVLRRWLLAQAERVGGSLRRQGLAGRTITLKVKYADFRQLTRSRTLPE 300

Query: 319 PIASVAEMSEIAELLLSPIFPAPKGIRLLGVTLS 352
           P+++   + E A  LL  +    K +RL+G+ +S
Sbjct: 301 PVSATQTIFEEAWALLEALDLEAK-VRLVGLGVS 333