Pairwise Alignments

Query, 369 a.a., DNA polymerase IV from Sinorhizobium meliloti 1021

Subject, 417 a.a., DNA-directed DNA polymerase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  201 bits (512), Expect = 2e-56
 Identities = 135/338 (39%), Positives = 180/338 (53%), Gaps = 5/338 (1%)

Query: 19  IIHIDMDAFYASVEQRDNPELRGKPVAVGYPEARGVVAAASYEARKFGVHSAMPSVTAKR 78
           I H+D DAF+ASVE+RDNP L  +PV +G    RGVV+ A Y AR  GV SAMP   A  
Sbjct: 37  IAHMDCDAFFASVEKRDNPALADRPVIIGGGR-RGVVSTACYVARIKGVRSAMPMFKALA 95

Query: 79  KCPELIFVPHRFDVYRAVSRQIQAIFAEYTPLVEPLSLDEAYLDV--TENFRGLKLATEI 136
            CP+ + +  RF+ Y   SR I+A+  E TP VEPLSLDEA++D+  T    G   A  +
Sbjct: 96  LCPDAVVIKPRFEAYVEASRAIRAMMDEMTPDVEPLSLDEAFMDLGGTARLHGAPPAVML 155

Query: 137 AEEIRGRIRAETHLTASAGVSYNKFLAKMASDQRKPDGLFVITPKHGPDFVQALPVKKFH 196
           A  ++ R+  E  LT S G+S+NKFLAK+ASD  KP G  VI      DF+   PV+   
Sbjct: 156 ARLVK-RMEDELGLTGSIGLSHNKFLAKIASDLDKPRGFAVIGKAETLDFLADKPVRMIW 214

Query: 197 GVGPATAEKMKRLGIETGADLKSRDLAFLQQHFGKSGPYFYWIARGIDERKVKPDRIRKS 256
           GVG A    ++  GI T  DL   +   L   FG  G   + +ARG D R V      KS
Sbjct: 215 GVGAAGQAALEAAGIRTFTDLARWEQTDLVARFGSMGLRLWHLARGEDARAVSGRSPVKS 274

Query: 257 IGAEDTFREDVHDLETARAGLKPLIDKVWHYCEASGIRGKTMTLKVKWADFTQITRSKTI 316
           I  E TF ED  D +     +  + +KV    +A G+ G+ + LK+K +D   ITR +  
Sbjct: 275 ISNETTFSEDTADPDLLEGHVWRMAEKVAGRAKAQGLAGRVVVLKLKKSDHGLITR-RHA 333

Query: 317 VAPIASVAEMSEIAELLLSPIFPAPKGIRLLGVTLSSL 354
           +     +A+      + L    P  +  RLLGV LS L
Sbjct: 334 LRDATQIADRVFREAMALFRAVPDGQSYRLLGVGLSDL 371