Pairwise Alignments

Query, 369 a.a., DNA polymerase IV from Sinorhizobium meliloti 1021

Subject, 418 a.a., DNA polymerase IV-kappa DinB from Caulobacter crescentus NA1000

 Score =  222 bits (566), Expect = 1e-62
 Identities = 134/344 (38%), Positives = 185/344 (53%), Gaps = 9/344 (2%)

Query: 19  IIHIDMDAFYASVEQRDNPELRGKPVAVGYPEARGVVAAASYEARKFGVHSAMPSVTAKR 78
           I H+D DAFYASVE+RD+P LR  PV +G  + RGVV  A Y AR  G  SAMP   A +
Sbjct: 38  IAHMDCDAFYASVEKRDDPSLRDLPVIIGGGK-RGVVTTACYIARMSGAKSAMPMFKALK 96

Query: 79  KCPELIFVPHRFDVYRAVSRQIQAIFAEYTPLVEPLSLDEAYLDVT--ENFRGLKLATEI 136
            CP+ + +   F  Y+  SR+I       TPL++PLSLDEA++D+T  E   G   A  +
Sbjct: 97  LCPDAVVIKPNFAKYKEESRRIHEKLDRLTPLIQPLSLDEAWIDLTGTERLHGATPAQML 156

Query: 137 AEEIRGRIRAETHLTASAGVSYNKFLAKMASDQRKPDGLFVITPKHGPDFVQALPVKKFH 196
           A  ++  I  +  LT S G++ NKFLAK+AS+  KP G   I       F+   PV    
Sbjct: 157 AR-LQAEIERDIGLTVSVGLAPNKFLAKIASELDKPRGFSAIGAAEAQSFLANKPVNILP 215

Query: 197 GVGPATAEKMKRLGIETGADLKSRDLAFLQQHFGKSGPYFYWIARGIDERKVKPDRIRKS 256
           GVGPAT   +  +G+ T  D+ + DL  L    G  G   + +A G D R V PD+ RK+
Sbjct: 216 GVGPATVASLAEIGLRTVGDIAAADLKLLANRLGSGGMRLHRLAHGQDSRIVDPDQARKT 275

Query: 257 IGAEDTFREDVHDLETARAGLKPLIDKVWHYCEASGIRGKTMTLKVKWADFTQITRSKTI 316
           I AE TF +D+H  E     L PL +KV       G+ G+  TLK++  DF   TR +T+
Sbjct: 276 ISAETTFNDDLHKREDLEDELWPLCEKVAKQARQEGVAGRVATLKLRTPDFKIHTRRRTL 335

Query: 317 VAPIASVAEMSEIAELLLSPIFPAPKGI--RLLGVTLSSLDTVD 358
             P  +   + ++A  LLS     P+G+  RL+G  L+     D
Sbjct: 336 AVPTQTARTLFQVARELLS---AEPRGLAYRLIGAGLTEFVDAD 376