Pairwise Alignments

Query, 369 a.a., DNA polymerase IV from Sinorhizobium meliloti 1021

Subject, 359 a.a., DNA polymerase IV (RefSeq) from Shewanella sp. ANA-3

 Score =  257 bits (656), Expect = 4e-73
 Identities = 162/352 (46%), Positives = 214/352 (60%), Gaps = 13/352 (3%)

Query: 16  VRKIIHIDMDAFYASVEQRDNPELRGKPVAVGYPEA-RGVVAAASYEARKFGVHSAMPSV 74
           +RKIIHIDMD ++A+VE RD PE RGKP+AVG     RGV++  +YEARKFGV SAM + 
Sbjct: 1   MRKIIHIDMDCYFAAVEMRDFPEYRGKPLAVGGSRVQRGVISTCNYEARKFGVRSAMATG 60

Query: 75  TAKRKCPELIFVPHRFDVYRAVSRQIQAIFAEYTPLVEPLSLDEAYLDVTENFRGLKLAT 134
            A + CP+LI VP R  VY+ VS+QI+AIF  YT L+EPLSLDEAYLDV++       AT
Sbjct: 61  YALKLCPDLILVPGRMQVYKEVSQQIRAIFCRYTELIEPLSLDEAYLDVSDCKLFKGSAT 120

Query: 135 EIAEEIRGRIRAETHLTASAGVSYNKFLAKMASDQRKPDGLFVITPKHGPDFVQALPVKK 194
            IAE IR  I AET LTASAGV+  KFLAK+ASD  KP+G  VI P    +FV++L ++K
Sbjct: 121 LIAEAIRRDILAETGLTASAGVAPIKFLAKVASDLNKPNGQCVIPPDEVAEFVKSLSLRK 180

Query: 195 FHGVGPATAEKMKRLGIETGADLKSRDLAFLQQHFGKSGPYFYWIARGIDERKVKPDRIR 254
             GVG  TAEK+  LG+ T AD+++     L   FGK G      A GIDER +   R R
Sbjct: 181 IPGVGKVTAEKLSSLGLNTCADVQAYPKQELIARFGKFGTVLVERAHGIDERGISVSRER 240

Query: 255 KSIGAEDTFREDVHDLETARAGLKPLIDKVWHYC--EASGIRGKTMTLKVKWADFTQIT- 311
           KS+G E T  +D++ LE  +  +  LI ++       A G +     +K+K+ DF Q T 
Sbjct: 241 KSVGVETTLAQDIYTLEQCQQVMPGLIQELSSRLGRSAKGRQIHKQVVKLKFNDFKQTTI 300

Query: 312 --RSKTIVAPIASVAEMSEIAELLLSPIFPAPKGIRLLGVTLSSLDTVDDRS 361
             RS  +     SV    E+    ++      +GIRLLGV++   ++ D  S
Sbjct: 301 EHRSDEV-----SVVMFYELLSQAMAR--QEGRGIRLLGVSVGLAESKDTLS 345