Pairwise Alignments

Query, 369 a.a., DNA polymerase IV from Sinorhizobium meliloti 1021

Subject, 416 a.a., DNA-directed DNA polymerase (RefSeq) from Shewanella sp. ANA-3

 Score = 54.7 bits (130), Expect = 4e-12
 Identities = 65/284 (22%), Positives = 108/284 (38%), Gaps = 32/284 (11%)

Query: 23  DMDAFYASVEQRDNPELRGKPVAVGYPEARGVVAAASYEARKFGVHSAMPSVTAKRKCPE 82
           D + FY+S EQ  NP+ RGKP+ V      G+    S EA   G+    P       C  
Sbjct: 9   DGNKFYSSCEQIFNPQYRGKPLIV-VSNNDGMTVTLSPEAAALGLKKFTPYFQVAEFCRA 67

Query: 83  --LIFVPHRFDVYRAVSRQIQAIFAEYTPLVEPLSLDEAYLDVTENFRGLKLATEIAEEI 140
             ++     + +Y  +S Q   + +       P S+DE + +   +     L+  +  ++
Sbjct: 68  NGVVVCSSNYALYSEISSQFMKVASRECFSYFPYSIDEIFAEFGNDDTPQNLSI-LGRKL 126

Query: 141 RGRIRAETHLTASAGVSYNKFLAKMASDQRKP---DGLFVITPKHGPDFVQALPVKKFHG 197
           R  +  E  L    G+     LAK A+   K     G+ VI   +    + A+      G
Sbjct: 127 RHDVWREVRLPIGVGLGDTLTLAKAANHAAKRLGYRGVCVIKAHNREAILGAMLTTDVWG 186

Query: 198 VGPATAEKMKRLGIETGADLKSRDLAFLQQHFG----------KSGPYFYWIARGIDERK 247
           VG    +++  +GI T   L        ++ FG               F W    +++R+
Sbjct: 187 VGKRIGQRLSSMGIHTALQLAQMKTKTARKMFGVNIERTIFKLNGTKAFNWDDMPVNKRQ 246

Query: 248 VKPDRIRKSIGAEDTFREDVHDLETARAGLKPLIDKVWHYCEAS 291
           +   R   S+G   T  E          GLK  +   +H CEA+
Sbjct: 247 IFSTR---SVGQRITTIE----------GLKEALS--FHACEAA 275