Pairwise Alignments

Query, 896 a.a., sensor protein from Sinorhizobium meliloti 1021

Subject, 883 a.a., Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) from Pseudomonas fluorescens FW300-N2E2

 Score =  568 bits (1465), Expect = e-166
 Identities = 359/893 (40%), Positives = 510/893 (57%), Gaps = 32/893 (3%)

Query: 15  DALLALAEQGRRGKLTVFLGAAPGVGKTFAMLTRARRLKEEGGDIVIGLVETHGRGETAA 74
           DALLA   +  RG+L VFLGAAPGVGKT+AML  A     +G  +V G+VETHGR ET A
Sbjct: 8   DALLANLPRNDRGRLKVFLGAAPGVGKTYAMLQAAHTQLRQGVKVVAGVVETHGRAETEA 67

Query: 75  LLEGLEVLPRRQVLHNGRTLHEFDLDAALARRPRVILVDELAHTNFGESRHPKRYQDIEE 134
           LL GL   P  +  + G  L E DLD  LA RP ++LVDELAH+N   SRH KR+QDI+E
Sbjct: 68  LLGGLVQQPLVRSEYRGVMLEEMDLDGLLAARPALVLVDELAHSNAPGSRHAKRWQDIQE 127

Query: 135 LVDAGIDVWTALNIQHLESLSDVVAHIAGVPVRERVPDTVLNRADDVLLVDLPPAELIER 194
           L+ AGIDV+T +N+QHLESL+D V  I GV VRE +PD VL  AD++LL+DLP  EL+ER
Sbjct: 128 LLAAGIDVYTTVNVQHLESLNDQVRGITGVQVRETLPDWVLQEADELLLIDLPSRELLER 187

Query: 195 LKEGKVYLPDNAKRAADRFFRLGNLTALRELALRRTADRVDDQMVDYLRQNAIEGPWGAA 254
           L++GKVY+P+ A+ A D FF   NLTALRELA++  A +VD+ +    RQ     P    
Sbjct: 188 LRDGKVYVPEQARAAIDAFFTQTNLTALRELAMQTAAAQVDNDLAQGYRQLGQAAP-AVR 246

Query: 255 ERLLVCIGPDPLSEKVVRTASRLASSLNADWMVVSVERAEAESSGAMRQLDETFRLAEQL 314
            RLLV +G D  +E++VR ASR+A   +  W +V V+   A    + + L    +LAE+L
Sbjct: 247 GRLLVGVGADVQAERLVRHASRVAQRRHLPWSLVHVDSGVAHDESSRQYLQNAQQLAERL 306

Query: 315 GAETRRIIGNDFVEEILKLARREHATQIVIGTRRHYFPLRLFRRSLPDALAARAAGIAIH 374
           G E   +   +  + +++ A    AT +++G  R     RLF   L   L   A G+ I+
Sbjct: 307 GGEVVLLRAGEVAKTLIQHATERRATLLLVGQSRPRLRRRLFGGGLASRLLRDARGLEIN 366

Query: 375 LVTDGSAPAVKPAARRRSTLPDGWGRGVAIATGTAAAATALGLLIEQFVVLQNISLLFLL 434
           ++     P  +PA  R + +  G+   +A+    AA+A A G  I  ++ L NISL+FL+
Sbjct: 367 VLDSDEQP--RPARVRSNAVQTGFDYVLALTATVAASALAWG--ISGWLALPNISLVFLM 422

Query: 435 AVLVSATYAGYVAAIAAALISILAYNFCFIEPVGTFTVAEPHEVFALFVFLAAAMLAGGL 494
           AVL+ A  +    A+A A +S LAY+F FI P  +FT+    +V  L  FL  A L G L
Sbjct: 423 AVLLVAVRSSLGPALACAALSFLAYDFLFIPPNFSFTIQREEDVLTLVFFLLMAALTGNL 482

Query: 495 ASRVREQAKTARRRAAATQALYDFSRKLSGTANAEDVLWAAVTQIHATLRRNAALLLPED 554
           A+R R Q +  R     T  L D SRKL+   + + V+ AA   ++  L      LL  D
Sbjct: 483 AARQRRQLQALRDTQQETGELLDLSRKLTAATDRQAVISAAAQHLNG-LHDLQLCLLNRD 541

Query: 555 GDVRLMAAWPPDTELGLTDTMAGR----WAFEKKEAAGNGTGTLPNSPFQFRPLMSPHGV 610
           G       W  +T   LT T A R    WA++  + AG GTGTLP+  + + PL +  G 
Sbjct: 542 G----QRDWKVETGEPLTFTEAERAAADWAWQHDQPAGAGTGTLPSGRWWWWPLSAEGGP 597

Query: 611 VGVFGFL-QEDKPLEINEERALAAILDQTAIAVDRARLSRESLDQAAQLEG--EKFLAAL 667
           +G+ G    E KPL     R LAA+    A A+ RA+L+++   +AA+L G  E+  +AL
Sbjct: 598 LGLLGVCPNEGKPLSGQRRRLLAALSQPLAQALARAQLAQDL--EAARLHGETEQLRSAL 655

Query: 668 LSSISHDLRTPLATITGAVTSLRQLGERMSEESRDDLLKSIEEESGRLTRFVANLLDMTR 727
           L+S+SHDLRTPL ++ G++ SL  LGE +    R +LL+   +E+ RL R++ NLLDMTR
Sbjct: 656 LASVSHDLRTPLTSMRGSIDSLLALGEAIPLADRRELLEGTRDEAERLDRYIQNLLDMTR 715

Query: 728 IEAGTVNAKRDWVDVADVVHSAVERARKYFPGRVFETSIAPDLPLIRGDSVLLGQVIFNL 787
           +  G +   RDWV  AD+V SA+ R R           +  +LPL+   + L+ Q + N+
Sbjct: 716 LGHGALKLARDWVSPADIVGSALNRLRAVLAPLALSVEVPAELPLLYVHAALIEQALVNV 775

Query: 788 LDNANRFGGDEPVSIYGRR------EEDEIVLSVTDLGKGIAPADLDRVFDKFFRKGKPD 841
           L+NA RF       ++GR        + E+  +V D G GI   + + +FD F+   + D
Sbjct: 776 LENAARFS-----PVHGRLLLSAGVTDSEVFFAVADEGPGIPEQERENIFDMFYTAARGD 830

Query: 842 GRSLGTGLGLSISKGFVEAMDGRIKAESPAMKRRGTRISMRFPV-AETGITEK 893
               GTGLGL+I +G V A  GRI   +  +  RGT I++  P+ A+ G+ ++
Sbjct: 831 RGGQGTGLGLAICQGMVGAHGGRISV-ADGLDGRGTCITLHLPLQAQPGMDDE 882