Pairwise Alignments

Query, 896 a.a., sensor protein from Sinorhizobium meliloti 1021

Subject, 883 a.a., histidine kinase from Pseudomonas fluorescens FW300-N2C3

 Score =  551 bits (1421), Expect = e-161
 Identities = 344/885 (38%), Positives = 502/885 (56%), Gaps = 16/885 (1%)

Query: 15  DALLALAEQGRRGKLTVFLGAAPGVGKTFAMLTRARRLKEEGGDIVIGLVETHGRGETAA 74
           DALLA   +  RG+L VFLGAAPGVGKT+AML  A     +G  ++ G+VETHGR ET A
Sbjct: 8   DALLANLPRNGRGRLKVFLGAAPGVGKTYAMLQAAHTQLRQGVTVIAGVVETHGRAETEA 67

Query: 75  LLEGLEVLPRRQVLHNGRTLHEFDLDAALARRPRVILVDELAHTNFGESRHPKRYQDIEE 134
           LL GL   P  +  + G  L E DLD  LA RP ++LVDELAH+N  +SRH KR+QDI+E
Sbjct: 68  LLGGLAQQPLVRSEYRGVMLEEMDLDGLLAARPTLVLVDELAHSNAPDSRHAKRWQDIQE 127

Query: 135 LVDAGIDVWTALNIQHLESLSDVVAHIAGVPVRERVPDTVLNRADDVLLVDLPPAELIER 194
           L+ AGIDV+T +N+QHLESL+D V  I GV VRE +PD VL  AD++LL+DLPP EL+ER
Sbjct: 128 LLAAGIDVYTTVNVQHLESLNDQVRGITGVQVRETLPDWVLQEADELLLIDLPPRELLER 187

Query: 195 LKEGKVYLPDNAKRAADRFFRLGNLTALRELALRRTADRVDDQMVDYLRQNAIEGPWGAA 254
           L++GKVY+P+ A+ A D FF   NLTALRELA++  A +VD+ +    RQ     P    
Sbjct: 188 LRDGKVYVPEQARAAIDAFFSQTNLTALRELAMQTAAAQVDNDLALGYRQLGQAAP-AVR 246

Query: 255 ERLLVCIGPDPLSEKVVRTASRLASSLNADWMVVSVERAEAESSGAMRQLDETFRLAEQL 314
            RLLV +  D  +E++VR ASR+A   +  W +V V+   A    + ++L    +LAE+L
Sbjct: 247 GRLLVGVDGDVQAERLVRHASRVAQRRHLPWSLVHVDNGSARDEASRQRLQNAQQLAERL 306

Query: 315 GAETRRIIGNDFVEEILKLARREHATQIVIGTRRHYFPLRLFRRSLPDALAARAAGIAIH 374
           G E   +   +    +++ A    AT +++G  R     RLF   L   L   A G+ I+
Sbjct: 307 GGEVVLLRAGEVARTLIQHASERRATLVLVGQSRPRLRRRLFGGGLASRLLRGARGLEIN 366

Query: 375 LVTDGSAPAVKPAARRRSTLPDGWGRGVAIATGTAAAATALGLLIEQFVVLQNISLLFLL 434
           ++     P  +PA      +   +   +A+     A+A A G  I   + L NISL+FL+
Sbjct: 367 VLDSDEQP--RPARVHSGAVQTRFDYVLALLATVVASALAWG--ISGLLALPNISLVFLM 422

Query: 435 AVLVSATYAGYVAAIAAALISILAYNFCFIEPVGTFTVAEPHEVFALFVFLAAAMLAGGL 494
           AVL+ A  +    A+A A +S LAY+F FI P  + T+    +V  L  FL  A L G L
Sbjct: 423 AVLLVAVRSSLGPALACAALSFLAYDFLFIPPNFSLTIQREEDVLTLVFFLLMAALTGNL 482

Query: 495 ASRVREQAKTARRRAAATQALYDFSRKLSGTANAEDVLWAAVTQIHATLRRNAALL-LPE 553
           A+R R Q +  R     T  L D SRKL+   + + V+ AA   ++        LL    
Sbjct: 483 AARQRRQLQALRDTQQETGELLDLSRKLTAATDRQAVISAAAQHLNGWHDLQLCLLDRDS 542

Query: 554 DGDVRLMAAWPPDTELGLTDTMAGRWAFEKKEAAGNGTGTLPNSPFQFRPLMSPHGVVGV 613
            GD ++ +  P    L   +  A  W+++  ++AG GTGTLP+  + + PL +  G + +
Sbjct: 543 QGDWKVESGEP--LTLTEAERAAADWSWQHDQSAGAGTGTLPSGRWWWWPLSAEGGPLAL 600

Query: 614 FGFL-QEDKPLEINEERALAAILDQTAIAVDRARLSRESLDQAAQLEG--EKFLAALLSS 670
            G   +E +PL     R LAA+    A A+ RA+L+++   +AA+L G  E+  +ALL+S
Sbjct: 601 LGVCPKEGQPLSGQRRRLLAALSQPLAQALARAQLAQDL--EAARLHGETEQLRSALLAS 658

Query: 671 ISHDLRTPLATITGAVTSLRQLGERMSEESRDDLLKSIEEESGRLTRFVANLLDMTRIEA 730
           +SHDLRTPL  + G++ SL  LGE +    R +LL+   +E+ RL R++ NLLDMTR+  
Sbjct: 659 VSHDLRTPLTAMRGSIDSLLALGEAIPLADRRELLEGTRDEAERLDRYIQNLLDMTRLGH 718

Query: 731 GTVNAKRDWVDVADVVHSAVERARKYFPGRVFETSIAPDLPLIRGDSVLLGQVIFNLLDN 790
           G +   RDWV  AD+V SA+ R R           +  +LPL+   + L+ Q + N+L+N
Sbjct: 719 GALKLARDWVAPADIVGSALNRLRAVLAPLALTVEVPAELPLLYVHAALIEQALVNVLEN 778

Query: 791 ANRFG-GDEPVSIYGRREEDEIVLSVTDLGKGIAPADLDRVFDKFFRKGKPDGRSLGTGL 849
           A RF      + +      +E+  +V D G GI   + +++FD F+   + D    GTGL
Sbjct: 779 AARFSPAQGRLLLCAGATANEVFFAVADEGPGIPEEEREKIFDMFYTAARGDRGGQGTGL 838

Query: 850 GLSISKGFVEAMDGRIKAESPAMKRRGTRISMRFPV-AETGITEK 893
           GL+I +G V A  GRI   +  +  RGT I++  P+ A+ G+ ++
Sbjct: 839 GLAICQGMVGAHGGRISV-ADGLDGRGTCITLHLPLQAQPGMDDE 882