Pairwise Alignments

Query, 896 a.a., sensor protein from Sinorhizobium meliloti 1021

Subject, 803 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

 Score = 97.4 bits (241), Expect = 3e-24
 Identities = 71/213 (33%), Positives = 108/213 (50%), Gaps = 5/213 (2%)

Query: 661 EKFLAALLSSISHDLRTPLATITGAVTSLRQLGERMSEESRDDLLKSIEEESGRLTRFVA 720
           E+     +S++SH+LRTPL +ITGA+  +         E+  +LL   ++ S RL   + 
Sbjct: 570 ERLQREFISTVSHELRTPLTSITGALGLICSNVMGEVPEAMHELLDIAQQNSQRLNALID 629

Query: 721 NLLDMTRIEAGTVNAKRDWVDVADVVHSAVERARKYFP--GRVFETSIAPDLPLIRGDSV 778
           +LLDM ++ AG +        +   +  A+   R Y    G V +    P +  +  D++
Sbjct: 630 DLLDMDKLHAGKMRFALLRQPLQPQLELALRSNRNYAEQHGVVLQLGACPAV-TVEIDAM 688

Query: 779 LLGQVIFNLLDNANRFG-GDEPVSIYGRREEDEIVLSVTDLGKGIAPADLDRVFDKFFRK 837
            L QV+ NLL NA +F    E V +     +  + +SV D G GI+    +RVF KF + 
Sbjct: 689 RLQQVLSNLLSNAAKFSPAGEQVELSATLSDGRVRISVRDRGPGISADFRERVFQKFAQA 748

Query: 838 GKPDGRSL-GTGLGLSISKGFVEAMDGRIKAES 869
              D R   GTGLGL+ISK  +E M G+I  ES
Sbjct: 749 DSSDSRQQGGTGLGLAISKELIERMGGQIGFES 781