Pairwise Alignments

Query, 896 a.a., sensor protein from Sinorhizobium meliloti 1021

Subject, 637 a.a., GAF sensor signal transduction histidine kinase from Synechococcus elongatus PCC 7942

 Score =  102 bits (253), Expect = 1e-25
 Identities = 86/275 (31%), Positives = 145/275 (52%), Gaps = 20/275 (7%)

Query: 621 KPLEINEERALAAILDQTAIAVDRARLSRESLDQAAQLEG-EKFLAALLSSISHDLRTPL 679
           +P ++ ++    AI  Q  +A+ +A+  R       QLE  E+  + L + I H+LRTPL
Sbjct: 363 EPWDLADQELAEAIATQIGVALIQAQTFR-------QLENLERTRSNLTAIIGHELRTPL 415

Query: 680 ATITGAVTSLRQLGERMSEESRDDLLKSIEEESGRLTRFVANLLDMTRIEAGTVNAKRDW 739
           +T+   + SL    + MS + R  +L++  +++ RL   V + L ++R+E+G ++   + 
Sbjct: 416 STVQVCLESLATEPD-MSADLRQVMLQTALDDAERLRLLVQDFLTLSRLESGRIDWHPES 474

Query: 740 VDVADVVHSAVE-----RARKYFPGRVFETSIAPDLPLIRGDSVLLGQVIFNLLDNANRF 794
           + + + V  A+        R   P    E  +   LPL+R D   L +V+  LLDNA +F
Sbjct: 475 LALDECVAMAMSGLRSRHQRDSLPS--IEQKLPASLPLVRVDGDWLVEVLIKLLDNACKF 532

Query: 795 GGDEP-VSIYGRREEDEIV-LSVTDLGKGIAPADLDRVFDKFFRKGKPDGRSL-GTGLGL 851
              +  VSI    E D  + +++TD G+GI P  L+ VFD+F+++     RS  G+GLGL
Sbjct: 533 TSAQGHVSITAVVEGDRALRVAITDDGRGIEPDRLEAVFDRFYQEDGALRRSQGGSGLGL 592

Query: 852 SISKGFVEAMDGRIKAESPAMKRRGTRISMRFPVA 886
           +I +  VE + G I AES   + RG+      P+A
Sbjct: 593 AICRQIVERLGGHIWAESEG-RDRGSCFQFTLPLA 626