Pairwise Alignments

Query, 896 a.a., sensor protein from Sinorhizobium meliloti 1021

Subject, 1288 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  106 bits (264), Expect = 1e-26
 Identities = 79/243 (32%), Positives = 128/243 (52%), Gaps = 16/243 (6%)

Query: 648 SRESLDQAAQLEGEKFLAALLSSISHDLRTPLATITGAVTSLRQLGERMSEESRDDL-LK 706
           +RE+ +Q A+++ E      L+++SH++RTPL  I G      QLG+R + ESR  +  +
Sbjct: 659 AREAAEQLARIKSE-----FLANMSHEIRTPLNAILG----FAQLGQRETPESRARIGFQ 709

Query: 707 SIEEESGRLTRFVANLLDMTRIEAGTVNAKRDWVDVADVVHSAVE--RARKYFPGRVFET 764
            I +    L   + ++LD ++IEAG +  +    +  +VV   V+   A  +  G     
Sbjct: 710 RIHDAGQHLLGIINDILDFSKIEAGKMKLEMQPTNPCEVVDHVVKLMAASVFQKGLELRV 769

Query: 765 SIAPDLPL-IRGDSVLLGQVIFNLLDNANRFGGDEPVSIYGRREEDEIVLSVTDLGKGIA 823
             + +LP    GDS+ L QV+ NLL NA +F     +++   R+  +++ S+ D G G+ 
Sbjct: 770 EESDNLPAAFDGDSLRLAQVLLNLLGNALKFTDQGSITLREERDGQDLIYSIRDTGIGMN 829

Query: 824 PADLDRVFDKFFR-KGKPDGRSLGTGLGLSISKGFVEAMDGRIKAESPAMKRRGTRISMR 882
              L R+F  F +  G    R  GTGLGL+I+K  VE M G I+ ES     +GT  S+R
Sbjct: 830 REQLGRLFHAFEQGHGGASRRFGGTGLGLTITKRLVEMMGGSIEVES--TPGQGTCFSIR 887

Query: 883 FPV 885
            P+
Sbjct: 888 IPM 890