Pairwise Alignments

Query, 896 a.a., sensor protein from Sinorhizobium meliloti 1021

Subject, 348 a.a., sensor histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  129 bits (325), Expect = 2e-34
 Identities = 80/249 (32%), Positives = 137/249 (55%), Gaps = 10/249 (4%)

Query: 641 AVDRARLSRESLDQAAQLEGEKFLAALLSSISHDLRTPLATITGAVTSLRQLGERMSEES 700
           A+  ++L++    Q   LE  +   ++L S+SHDLRTPLATI G +T+L++   ++S   
Sbjct: 105 ALTSSKLAKHYRRQQDALEQAQLRNSILLSVSHDLRTPLATIIGTLTTLKEYQPKLSPAQ 164

Query: 701 RDDLLKSIEEESGRLTRFVANLLDMTRIEAGTVNAKRDWVDVADVVHSAVERARKYFPGR 760
            ++L+ S   ES RL +++ NLL   +++ G +    D  ++ +V+   + R +   P  
Sbjct: 165 TEELIDSAAAESHRLHQYIENLLQANKLQHGALKFSLDEANIREVLQRTIARFQTEQPR- 223

Query: 761 VFETSIAPDLPLIRGDSVLLGQVIFNLLDNANRFG-GDEPVSIYGRREEDEIVLSVTDLG 819
             +    P+LP +   S L+ Q IFN+LDNA  +    +PV++   R +  + + + D G
Sbjct: 224 -IQIQSEPELPSLMICSSLIEQAIFNVLDNALHYSPATQPVTVSLYRHQHMLRIDIQDQG 282

Query: 820 KGIAPADLDRVFDKFFRK-GKPDGRSLGTGLGLSISKGFVEAMDGRIKAESPAMKRRGTR 878
           KGIAP+    +F+ F+R+    DG   G GLGL ++KG + A +G I AE  A    G+ 
Sbjct: 283 KGIAPSQTGAIFELFYRQHPTTDG---GAGLGLPVAKGIITAHNGTISAEKVA---HGSL 336

Query: 879 ISMRFPVAE 887
           I +  P+ +
Sbjct: 337 IRIALPITK 345