Pairwise Alignments

Query, 896 a.a., sensor protein from Sinorhizobium meliloti 1021

Subject, 892 a.a., osmosensitive K+ channel histidine kinase kdpD from Caulobacter crescentus NA1000

 Score =  739 bits (1907), Expect = 0.0
 Identities = 410/887 (46%), Positives = 562/887 (63%), Gaps = 9/887 (1%)

Query: 7   DLKSRPDPDALLALAEQGRRGKLTVFLGAAPGVGKTFAMLTRARRLKEEGGDIVIGLVET 66
           D   RPDP+ALLA A + RRG+L VFLG APGVGKT+ ML  ARR K EG D++IG+VET
Sbjct: 4   DDPKRPDPEALLAAANKARRGRLKVFLGMAPGVGKTYEMLRAARRRKAEGADVLIGVVET 63

Query: 67  HGRGETAALLEGLEVLPRRQVLHNGRTLHEFDLDAALARRPRVILVDELAHTNFGESRHP 126
           HGR ET +LL G++VLPRR + H GR   EFD+DAAL R+P+++LVDE AH+N   SRHP
Sbjct: 64  HGRRETESLLRGMDVLPRRPIEHRGRVQMEFDIDAALERKPKILLVDEYAHSNAIGSRHP 123

Query: 127 KRYQDIEELVDAGIDVWTALNIQHLESLSDVVAHIAGVPVRERVPDTVLNRADDVLLVDL 186
           KR+QD+EEL+ AGIDVWT LN+QHLESL DVV  I GV  RE VPD+ L+RADD+ LVD+
Sbjct: 124 KRWQDVEELLAAGIDVWTTLNVQHLESLVDVVQRITGVRQRETVPDSALSRADDIELVDI 183

Query: 187 PPAELIERLKEGKVYLPDNAKRAADRFFRLGNLTALRELALRRTADRVDDQMVDYLRQNA 246
            P EL ER+  GKVY+P+ A+ AAD FF++ NLTALRELALRR A  VDDQ++  +R+  
Sbjct: 184 TPDELRERMAAGKVYVPETARLAADNFFKVENLTALRELALRRAAQTVDDQLIATMREKG 243

Query: 247 IEGPWGAAERLLVCIGPDPLSEKVVRTASRLAS-SLNADWMVVSVERAE--AESSGAMRQ 303
           +EGPW A ER+LV +  D ++  +VR   RL+   ++A W+V  VER +      G   +
Sbjct: 244 VEGPWAAGERILVLVSGDAMAATLVRAGRRLSDMMMDAPWIVTHVERTDRPLARDGDAAR 303

Query: 304 LDETFRLAEQLGAETRRIIGNDFVEEILKLARREHATQIVIGTRRHYFPLRLFRRSLPDA 363
           L E +RLAEQLG  T  + G D V+ ++  ARR + TQIVIG         L  RSL  A
Sbjct: 304 LREAYRLAEQLGGATVALSGGDIVDTVMAYARRHNVTQIVIGKSVESRWRELLERSLAGA 363

Query: 364 LAARAAGIAIHLVTDGSAPAVKPAARRRSTL-PDGWGRGVAIATGTAAAATALGLLIEQF 422
           L   A G+A+H+VT+ +AP  +P  R  + L PD W RG A+     AAAT     ++  
Sbjct: 364 LLREARGVAVHVVTE-AAPEREP--RPPAPLRPDRW-RGYAVGALFIAAATLAAWGLDVA 419

Query: 423 VVLQNISLLFLLAVLVSATYAGYVAAIAAALISILAYNFCFIEPVGTFTVAEPHEVFALF 482
               ++ ++FL AVL +    G   A+AAA ++ L YN  F+EP  +F V  P +   L 
Sbjct: 420 FNRVDLGMIFLTAVLAAGVLHGLRPALAAATVAFLVYNCLFLEPRYSFVVGSPTDFITLV 479

Query: 483 VFLAAAMLAGGLASRVREQAKTARRRAAATQALYDFSRKLSGTANAEDVLWAAVTQIHAT 542
           VF A A+ +GGLA RVREQA  ++RRAAA   L   SR  S  +  + V  A   Q+ A 
Sbjct: 480 VFWAVALASGGLAGRVREQALGSQRRAAAVTTLLAASRTFSAASGRDAVAKALAEQVSAA 539

Query: 543 LRRNAALLLPEDGDVRLMAAWPPDTELGLTDTMAGRWAFEKKEAAGNGTGTLPNSPFQFR 602
               A +LLP+  ++ L    P    L      A RWA++K E AG GTGTLP S + F 
Sbjct: 540 AGGLAVVLLPQGDEIALAHGSPELAPLDAAQMAAARWAWDKGEVAGFGTGTLPQSRWTFW 599

Query: 603 PLMSPHGVVGVFGFLQEDKPLEINEERALAAILDQTAIAVDRARLSRESLDQAAQLEGEK 662
           PL       GV G      PL  ++ER + A+L+Q A+A++R++L+ E+++       ++
Sbjct: 600 PLDGVRARTGVAGLAAGAAPLGADQERLVLALLEQGAVALERSQLAAEAVETETLRRADR 659

Query: 663 FLAALLSSISHDLRTPLATITGAVTSLRQLGERMSEESRDDLLKSIEEESGRLTRFVANL 722
           F +AL++S+SHDLRTPL+T+ GA T+L   G+++++  R+DL+ SI EE+ RL R+VANL
Sbjct: 660 FRSALMNSVSHDLRTPLSTVLGASTTLIDYGDKLAKPVREDLVVSIREEAERLNRYVANL 719

Query: 723 LDMTRIEAGTVNAKRDWVDVADVVHSAVERARKYFPGRVFETSIAPDLPLIRGDSVLLGQ 782
           LDMTRIE G +  + DW+DV DV+++A +R  +   GR        +L LI+ D+ LL Q
Sbjct: 720 LDMTRIEGGALRLRTDWIDVRDVLNAAADRVSRRLGGRELARDFPRELSLIQADASLLEQ 779

Query: 783 VIFNLLDNANRFGGDEP-VSIYGRREEDEIVLSVTDLGKGIAPADLDRVFDKFFRKGKPD 841
           V+ N+L+NA  +   E  + +    +   +V+S+ D G+GI  ++L+RVFDKF R  +P 
Sbjct: 780 VVVNVLENAIAYSPPEARIEMAAYEDRANVVISIEDEGRGIPTSELERVFDKFRRMEEPS 839

Query: 842 GRSLGTGLGLSISKGFVEAMDGRIKAESPAMKRRGTRISMRFPVAET 888
            R+ G GLGLSI+KGF++A+ GRI A SP    RGTRI +  P   T
Sbjct: 840 DRTQGAGLGLSIAKGFIDALGGRIAAASPIHDGRGTRILISLPKTVT 886