Pairwise Alignments

Query, 896 a.a., sensor protein from Sinorhizobium meliloti 1021

Subject, 635 a.a., two-component system sensor histidine kinase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 94.4 bits (233), Expect = 2e-23
 Identities = 86/301 (28%), Positives = 150/301 (49%), Gaps = 35/301 (11%)

Query: 615 GFLQE-DKPLEINEER-----ALAAILDQTAIAV-----DRARLSRESLDQAAQLE-GEK 662
           G L+E + PLE++  +      +A     T +A+     DR R S E ++   + E  ++
Sbjct: 221 GKLKEIEYPLEVDGSKHYFQARIAPFEGNTVLALIHDIGDRIRRSEELIEAKRRAEDADR 280

Query: 663 FLAALLSSISHDLRTPLATITGAVTSLRQLGERMSEESRDDLLKSIEEESGRLTRFVANL 722
             +  L+++SH++RTPL  I G  + +  L E  +EE + + L+ I++ S  L + + ++
Sbjct: 281 MKSVFLANMSHEIRTPLNAIVG-FSEIMALTE--NEEEKHEYLEIIQKNSNLLLQLINDI 337

Query: 723 LDMTRIEAGTVNAKRDWVDVADVVHSAVERARKYFPGRVFETSIAPDLPLIR-------- 774
           LD++RIE+G        V++A +V   VE+  +       +  +  DL ++R        
Sbjct: 338 LDLSRIESGKSEMHFQQVEIAGLV-DEVEKVHQ------LKMKLNVDLKVVRPQGEFWTS 390

Query: 775 GDSVLLGQVIFNLLDNANRFGGDEPVSIYGRREEDEIVLSVTDLGKGIAPADLDRVFDKF 834
            D   + QV+FN L NA +      +++  ++E D + L V+D G GI    L ++F +F
Sbjct: 391 TDRNRVMQVLFNFLSNAIKNTETGSITLGLKQEGDWLKLFVSDTGCGIPEEKLPQIFTRF 450

Query: 835 FRKGKPDGRSLGTGLGLSISKGFVEAMDGRIKAESPAMKRRGTRISMRFPVAETGITEKE 894
               K +    GTGLGLSI K  VE + GRI+  S     +G+  ++  P  E  +   E
Sbjct: 451 ---EKLNDFVQGTGLGLSICKSIVERLGGRIEVSSEL--GQGSTFALYLPYQEIPVEVAE 505

Query: 895 R 895
           R
Sbjct: 506 R 506