Pairwise Alignments

Query, 896 a.a., sensor protein from Sinorhizobium meliloti 1021

Subject, 377 a.a., FrrC, osmosensitive K+ channel histidine kinase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  248 bits (634), Expect = 4e-70
 Identities = 134/351 (38%), Positives = 207/351 (58%), Gaps = 7/351 (1%)

Query: 7   DLKSRPDPDALLALAEQGRRGKLTVFLGAAPGVGKTFAMLTRARRLKEEGGDIVIGLVET 66
           D+         L L ++  RGK  +++G   GVGK++ ML  A  L E G D+ IG +ET
Sbjct: 2   DMDREQSVQHFLDLIKKSHRGKFKIYIGMIAGVGKSYRMLQEAHELLENGVDVQIGYIET 61

Query: 67  HGRGETAALLEGLEVLPRRQVLHNGRTLHEFDLDAALARRPRVILVDELAHTNFGESRHP 126
           HGR  T AL++GL V+PRR++ + G+ L E D+DA +   P +++VDELAHTN   S + 
Sbjct: 62  HGRAGTEALMQGLPVIPRRKIFYKGKELEEMDVDAIIRLHPEIVIVDELAHTNVEGSLNE 121

Query: 127 KRYQDIEELVDAGIDVWTALNIQHLESLSDVVAHIAGVPVRERVPDTVLNRADDVLLVDL 186
           KR+QD+  L+D GI+V +A+NIQH+ES+++ V  I G+ V+ERVPD+VL  AD+V+ +DL
Sbjct: 122 KRWQDVMTLLDEGINVISAINIQHIESVNEEVQEITGIEVKERVPDSVLQEADEVVNIDL 181

Query: 187 PPAELIERLKEGKVYLPDNAKRAADRFFRLGNLTALRELALRRTADRVDDQMVDYLRQNA 246
              ELI RLK GK+Y P+  + A D FFR  N+  LRELAL+  A RV+ ++ + +    
Sbjct: 182 TAEELISRLKAGKIYRPEKIQTALDNFFRTENILQLRELALKEVALRVEKKVENEVVMGV 241

Query: 247 IEGPWGAAERLLVCIGP-DPLSEKVVRTASRLASSLNADWMVVSV----ERAEAESSGAM 301
             G     E+ + CI   +    +++R A+RLA+  N  ++ + V    E  +     + 
Sbjct: 242 SVGI--RHEKFMACISSHEKTPRRIIRKAARLATRYNTTFVALYVQTPRESMDRIDLASQ 299

Query: 302 RQLDETFRLAEQLGAETRRIIGNDFVEEILKLARREHATQIVIGTRRHYFP 352
           R L   F+L  +LG E  ++   D +  I+K+ R +  + + +GT    FP
Sbjct: 300 RYLLNHFKLVAELGGEVIQVQSKDILGSIVKVCRDKQISSVCMGTPNLRFP 350