Pairwise Alignments

Query, 230 a.a., transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 257 a.a., two component transcriptional regulator, winged helix family from Synechococcus elongatus PCC 7942

 Score =  141 bits (355), Expect = 1e-38
 Identities = 93/233 (39%), Positives = 127/233 (54%), Gaps = 11/233 (4%)

Query: 3   AERILVADDEPQIQRFLRPALAAAGYEVIEAANGAQALK---------AAVTAAPDVVIL 53
           A RILV +DE  I+  +   L   G+ V  AA+G  AL           +VT  PD+V+L
Sbjct: 23  ASRILVVEDEAVIRDMVALVLQQEGFTVDVAADGRTALNYFRSDSPEAGSVTENPDLVVL 82

Query: 54  DLGLPDMDGKDVVANIRAWS-QVPIIILSARDRESEKIAALDLGADDYIEKPFGIGELTA 112
           DL LP ++G D    +R     VPI++LSA+D E++++  L++GADDY+ KPFG  EL A
Sbjct: 83  DLMLPAVNGLDFCRLLRRQGVTVPILMLSAKDTETDRVVGLEIGADDYLTKPFGTRELVA 142

Query: 113 RIRAALRH-RIQMAGGQAQLSADGLSIDMVKRVVTRDGAALRLTPKEYDLLVMLAHHAGR 171
           R RA LR  + Q A   A L  +GL +   +  V  D   L L+PKE+ LL +   H  R
Sbjct: 143 RCRALLRRSQNQPAETPAVLRYEGLKLFPEECRVLLDDRELTLSPKEFRLLELFMRHPRR 202

Query: 172 VVTHRTLLTSVWGLAHGEDLHYLRVFIGQLRGKIERDPGNPKIVRTEPGVGYR 224
           V +   LL  +WG+    D   + V I  LR KIE +P NP  + T  G GYR
Sbjct: 203 VWSRDQLLEKIWGIDFMGDSKTIDVHIRWLREKIEANPSNPSYLLTVRGFGYR 255