Pairwise Alignments

Query, 273 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 312 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  164 bits (414), Expect = 3e-45
 Identities = 97/276 (35%), Positives = 156/276 (56%), Gaps = 10/276 (3%)

Query: 6   LYMTVVGAILIIWLAPLFAVILTSFRSMADVMSGNLWGWPTEIAV---VENYTAVFTQTP 62
           LY  +V    + +L PLF ++LTS +++ D+ +G+L   P  +     ++ + +      
Sbjct: 39  LYAVLV-LFALYYLLPLFVMLLTSVKTLDDIRAGSLIALPRTLTFEPWLKAWDSACVGVQ 97

Query: 63  MAG---YFLNSLVITIPSVIGVLSLSTLAGFVLARYRFPGNMVIFALFVGGNFLPHQIMM 119
            AG   YFLNSL++ +P+V     L  L G+ L ++RFPG+ +IFAL + G F+P Q+++
Sbjct: 98  CAGLKPYFLNSLLLVVPAVAISTVLGALNGYALTKWRFPGSQLIFALMLFGCFIPFQVVL 157

Query: 120 IPVRDLMVRLNLYDTTTALIIFHVAFQTGFATLFMRNFIAALPDELFQAARAEGATPFQT 179
           +P+  ++    L  +   LI+ HV +   F TLF RNF   +PDEL +AA  +GA  F+ 
Sbjct: 158 LPMARVLGLAGLAGSIQGLILVHVVYGLSFTTLFFRNFYMTVPDELVRAATIDGAGFFRI 217

Query: 180 LIHVVVPLVRPAWAALAILLFTFIWNDYFWAVVLTVSDNVKPVTAGLANL--RGEWVSAW 237
              +++P+  P      I  FT I+ND+ + V  TVS   +PVT  L NL      V  +
Sbjct: 218 FFSILLPMSPPIIVVTIIWQFTQIYNDFLFGVSFTVSGG-QPVTVALNNLVASSTGVKEY 276

Query: 238 NLISAGTIIVAVPPVVMFFLMQKHFIAGLTMGAVKG 273
           N+  A  I+ A+P +V++ +  K+FI GL+ GAVKG
Sbjct: 277 NVDMAAAILTALPTLVVYAVAGKYFIRGLSAGAVKG 312