Pairwise Alignments

Query, 422 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 458 a.a., carbohydrate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 44.7 bits (104), Expect = 6e-09
 Identities = 54/216 (25%), Positives = 86/216 (39%), Gaps = 9/216 (4%)

Query: 28  GFPIPALAQSSEVTIISAESNANTAEVLRRIAADFGKAAGTKVVVNNMDHEAHKTAIRNY 87
           G  +     +SE+ I S  ++       + I A      G KV  N + +  +   +   
Sbjct: 10  GLLLSGQLMASELVIESWRADDKALWEQKIIPAFEAANPGIKVKFNPVPNVNYTPTLWEN 69

Query: 88  LVAG-APDVCFWFSGNRMRAFVTRGLFDDISDLFEKEKYADVLGATAGSVTVEGKQ-YGL 145
           L AG A D+      +   A    G   +I+++   E +     A A   T  G Q + +
Sbjct: 70  LKAGKAGDLITCRPFDDSLALFKAGHLAEITEMAGMENFPSF--AQAPWQTDSGAQTFCV 127

Query: 146 PTGGTLWGMFYRKDVFDEHGLKVPTSWDDLLAFGEKCKS-ASLTPVAMGTKDLWPAAGWF 204
           P    + G FY K +F+E GL VP + +      +K K+     P++M   + W  A   
Sbjct: 128 PMASVIHGFFYNKKIFNELGLSVPQTREQFFTVLDKVKADGRYIPLSMSGSESW-VASEL 186

Query: 205 DQMNLRIN---GLDKHFALMNGEMAYTDETLKPVFE 237
              N+  N   G D   AL+NG+    D     VFE
Sbjct: 187 GYQNIGPNYWKGEDGRLALINGQEHLDDSQYVKVFE 222