Pairwise Alignments

Query, 408 a.a., ROK family transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 406 a.a., DNA-binding transcriptional dual regulator NagC from Klebsiella michiganensis M5al

 Score =  133 bits (335), Expect = 8e-36
 Identities = 98/387 (25%), Positives = 167/387 (43%), Gaps = 10/387 (2%)

Query: 24  GDQSTTRAMNRRLILNLLRREGAKSRAEIAAATGLSPAAVTFVVSDLIEEGLLIEGQSVA 83
           G+    + +N   +  L+ + G  SR +IA  + L+PA+VT +   LIE GL+ E    A
Sbjct: 10  GNVDLVKQLNSAAVYRLIDQHGPISRIQIAEQSQLAPASVTKITRQLIERGLIKEVDQQA 69

Query: 84  GAQGRRPIPVAIDYAGGVALGFKLMAGSVECVVTDLETTPLASLRLPLPAHDPDTIAEAL 143
              GRR I +  +     A+G +L        + DL +  L     PLP    +T+  AL
Sbjct: 70  STGGRRAISIVAETRSFHAIGVRLGRYDATLTLYDLSSKTLEEEHYPLPERTQETLEHAL 129

Query: 144 AAAAPKLVALANRPAARLAGIGIAMPGVIDNQRAVCIRSNRYGWDNVPLGDLVASRIGVP 203
                  +    R    L  I + +PG++D +  V         +N  L + +  R  V 
Sbjct: 130 LNIIAAFMESCQRKIRELIAISVILPGLVDPESGVIRYMPHIQVENWGLVEALEKRFKVT 189

Query: 204 VWLEDDTNAYAIAQQLFGLGRHYKTMGVLAIGVGVACSLVLDGKLYRGAHGAAGKFGHFP 263
            ++  D  + A+A+  FG     +   ++ +  G    ++ +G+++ G +G  G+ GH  
Sbjct: 190 CYVGHDIRSLALAEHYFGASHDCEDSILVRVHRGTGAGIISNGRIFIGRNGNVGEIGHIQ 249

Query: 264 HMEGGRPCECGKRGCLMSYFSEPA-------MLQTWHERSGRPETDGRAEMVAAIAAGDK 316
               G  C CG  GCL +  +  A       +L+  ++     +      +  A   GD 
Sbjct: 250 VDPLGERCHCGNFGCLETVAANAAIEHRVRHLLEQGYQSKISLDDCTIKTICKAANKGDA 309

Query: 317 AAHSVMREAGETLGRHLAGLMNVIDPEVIVVGGEAVAYGDALFGPLRA---TLERFAFRQ 373
            A  V+   G  LG+ +A  +N+ +P+ +V+ GE V     L   + A   T    AFR+
Sbjct: 310 LACEVIEHVGRHLGKTIAIAINLFNPQKVVIAGEIVEAEKVLLPAIEACINTQALKAFRK 369

Query: 374 APPVLLDWEDDSWARGAAALVTQKLFD 400
             PV+    D   A GA ALV + + +
Sbjct: 370 NLPVVRSTLDHRSAIGAFALVKRAMLN 396