Pairwise Alignments

Query, 408 a.a., ROK family transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 391 a.a., ROK family protein from Bifidobacterium breve UCC2003

 Score =  117 bits (293), Expect = 6e-31
 Identities = 112/382 (29%), Positives = 173/382 (45%), Gaps = 32/382 (8%)

Query: 23  KGDQSTTRAMNRRLILNLLRREGAKSRAEIAAATGLSPAAVTFVVSDLIEEGLLIE-GQS 81
           K + S  RA NRRL+  LL  +   SRA++   TGLS A  T V  ++I++GLL E G  
Sbjct: 4   KSNPSDARANNRRLLFRLLFPDRQLSRADLCKETGLSRATATDVTGEMIDDGLLRELGSR 63

Query: 82  VAGAQGRRPIPVAIDYAGGVALGFKLMAGSV-ECVVTDLETTPLASLRLPLPAHDPDTIA 140
               +G+    +AID      +   L    V    V DL    +      L   D   + 
Sbjct: 64  KRDGRGKPGTLLAIDTDVLRLICIDLSRPYVITGAVMDLRARIVERRERVLDDGDRVDLD 123

Query: 141 EALAAAAPKLVALANRPAARLAGIGIAMPGVIDNQRAVCIRSNRYGWDNVPLGDLVASRI 200
           + L+    +++ LA    + L GIG+A+PGV+     V I S+  GWD+V L D++    
Sbjct: 124 DVLSLVG-QMIRLA---GSGLVGIGVAVPGVVSGAGRV-ISSSNLGWDDVELRDMLEGEF 178

Query: 201 GVPVWLEDDTNAYAIAQQLFGLGRHYKTMGVLAIGVGVACSLVLDGKLYRGAHGAAGKFG 260
            +P  +++D NA  +A    G G       ++ I  G+  S++L+ +   G   AAG+ G
Sbjct: 179 SLPARVDNDANAALLADHFLGHGN--PNCLLVQITRGIGASVLLNDEFVDGDDHAAGEIG 236

Query: 261 HFPHMEGGRPCECGKRGCLMSYFSEPAMLQTWHERSGRPETDGRAEMVAAIAAGDKAAHS 320
           H      G  C CGKRGCL +Y S  A+         R + + RA+++A           
Sbjct: 237 HVVIDPNGPACTCGKRGCLETYVSAIALRDRI-----RRDPNRRADILA----------- 280

Query: 321 VMREAGETLGRHLAGLMNVIDPEVIVVGGEAVAYGDALFGPLRAT---LERFAFRQAPPV 377
              EAG  LG  LA  +++++   I V G     G+ L      T   L R  ++    V
Sbjct: 281 ---EAGARLGEALAMPVSLLNLHDIAVYGPPDIVGETLLNACDETVNSLSRNDYQSGMRV 337

Query: 378 -LLDWEDDSWARGAAALVTQKL 398
              +  DD+  RG A  V +++
Sbjct: 338 RRCELGDDATLRGQAVSVLREI 359