Pairwise Alignments

Query, 408 a.a., ROK family transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 394 a.a., ROK family protein from Bifidobacterium breve UCC2003

 Score =  110 bits (276), Expect = 6e-29
 Identities = 100/384 (26%), Positives = 171/384 (44%), Gaps = 32/384 (8%)

Query: 17  MSDVRTKGDQSTTRAMNRRLILNLLRREGAKSRAEIAAATGLSPAAVTFVVSDLIEEGLL 76
           ++++ TK   S  RA N   + NLL      SR E+    GLS  A++ V  ++ +  ++
Sbjct: 15  LTNIATKTVPSDIRANNTMAVFNLLFPATHMSRVELKRHIGLSRMAISKVTEEMTDHRII 74

Query: 77  IE-GQSVAGAQGRRPIPVAIDYAGGVALGFKLMAGSV-ECVVTDLETTPLASLRLPLPAH 134
            E G      +G+R   +AID A    +   L    V    + DL    +  +   +   
Sbjct: 75  RETGIDNRTGRGKRSTVLAIDTAYWRVIAIDLTQSFVIRGALVDLCGRIVQRVESTVETT 134

Query: 135 DPDTIAEALAAAAPKLVALANRPAARLAGIGIAMPGVIDNQRAVCIRSNRYGWDNVPLGD 194
              TI + +A    +L ++++ P     G+G+A+PG++D++  V + +   GW ++PL  
Sbjct: 135 GAITIDDVIALIG-RLRSISDLPTL---GVGVALPGIVDSEGTV-LNAVHLGWSHLPLRA 189

Query: 195 LVASRIGVPVWLEDDTNAYAIAQQLFGLGRHYKTMGVLAIGVGVACSLVLDGKLYRGAHG 254
            +   +G+PV + + T    IA++ FG G     +  + IG GV  +L ++ ++  G   
Sbjct: 190 RLEEALGLPVSVNNSTRMALIAERFFGEGSPNSLL--VRIGQGVGAALCVNDEVVDGQAF 247

Query: 255 AAGKFGHFPHMEGGRPCECGKRGCLMSYFSEPAMLQTWHERSGRPETDGRAEMVAAIAAG 314
            AG+ GH      G  C CG+ GCL ++ S                    + + A IA  
Sbjct: 248 TAGEIGHITIDPTGPVCACGRPGCLETFLSS-------------------SRLHAMIAEN 288

Query: 315 DKAAHSVMREAGETLGRHLAGLMNVIDPEVIVVGGEAVAYGDALFGPLRATLE---RFAF 371
            +    ++ EAG+TLGR LA    ++D + I V G      +A  G +   L     F  
Sbjct: 289 PQRRTQILSEAGQTLGRVLAIPAGLLDLDNIAVYGPPEIVSEAFLGSMNEELSASISFGN 348

Query: 372 RQAPPVL-LDWEDDSWARGAAALV 394
           R AP +      +D   RG A +V
Sbjct: 349 RTAPRLYRCQQGEDLVLRGQAVVV 372